Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0015 ATGAGAGAAATGTATTGGGGTTGGTCTGTAGTGGCAGCCACCCTCTTGTTCATTTGGTTTGCTGCCAAGTTTGTGATCAACAAGAAGAAGAATGTGGGCGGAGAAAGATCATCAGTAGTGTACAAAATGCCGCCGGGGAGTAGAGGTTGGCCTTTGATCGGCCATAGCTTAAGTTGGTACAACTCGGTTGCAGGTCCTCATCCTCCTCGCTTTGTTCACCAGCAGGCTCTAAAGTTTGGGAAGATATTTTCTTGTAGTCTGTTTGGTAAATGGGCAGTTGTGTCTGCAGACTCGGGCTTTAACAGATTCATCATGCAAAATGAAGGCAAATTGTTCCAGTCCAGTTACCCGAAATCTTTCAGAGATTTGGTTGGGAAAAATGGGGTGATTACAGTGCAAGGAGAGCAACAAAGGAAACTGCATAGCATCGCATCCAATATGATGCGGTTGGAGAAGCTTAAGTTTCATTTTTTGAAGGATATTCAAATGATTATGCTGCAAACCTTGGGCAATTTTGCTAACAATCAAGTTATTCTCCTTCAGGATGTTTGCAGAAAGGTGGCCATTAACCTGATGGTGAATCAACTGCTGGGTGTGTCTACTGAGTCTGAAATCAACCAAATGGCTCAACTGTTCTCTGATTTCGTTGATGGGTGTCTCTCTATTCCAATCAACTTTCCGGGTTTCGCTTTCCACACTGCCATGAAGGCAAGGGAGGCTATAATAAGCAAAATCAACAGGATAATACAGATGCGCCGACAGCAAAACTTATCATCGAAAGAAGGTGATGGTGTACTTGGAAGACTAATAGAGGAAGAAAGCTTGGGTGATGATGCAGTAGCTGACTTCATTATCAATCTTCTGTTTGCTGGGAATGAAACAACAGCTAAAACCATGCTCTTTGCTGTTTATTTCCTCACTCACTGCCCTAGGGCAATGAAGCAACTACTGGTAATTATAAGCAGGCCTATCAATGGAGAAGAAGAGCTACTGACATGGCAAGATTATAAAGCAATGCCTTTCACTCAATGTGTGATTGATGAAACACTTAGACTTGGGGGCATTGCAATATGGTTGATGAGGGAGGCAAAAGAAGATGTTAAATACCAAGATTATGTGATTCCCAAAGGGTGCTTTGTGGTACCCTTTCTTTCAGCAGTGCATTTGGATGAGAATATATACAAGGGAGCTCTCTCCTTCAATCCTTGGAGATGGATGGAACCTGAAAATCAAGAAAAAAGAAATTGGAGGAGCAGTCCATTATACAGTCCATTTGGAGGAGGGGCTAGATTTTGTCCAGGAGCAGAGTTGGCTCGTCTTCAAATTGCACTCTTTCTCCACTACTTTGTTACCACTTACAGGTGGAGGCAGATGAAAGAAGATAGGATGTCATTTTTCCCATCTGCTCGTTTAGTGAATGGCTTCCAAATTTGCTTAACCAGAAGCAGCTGCCTAGTTTGA 1461 0.4285 MREMYWGWSVVAATLLFIWFAAKFVINKKKNVGGERSSVVYKMPPGSRGWPLIGHSLSWYNSVAGPHPPRFVHQQALKFGKIFSCSLFGKWAVVSADSGFNRFIMQNEGKLFQSSYPKSFRDLVGKNGVITVQGEQQRKLHSIASNMMRLEKLKFHFLKDIQMIMLQTLGNFANNQVILLQDVCRKVAINLMVNQLLGVSTESEINQMAQLFSDFVDGCLSIPINFPGFAFHTAMKAREAIISKINRIIQMRRQQNLSSKEGDGVLGRLIEEESLGDDAVADFIINLLFAGNETTAKTMLFAVYFLTHCPRAMKQLLVIISRPINGEEELLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVKYQDYVIPKGCFVVPFLSAVHLDENIYKGALSFNPWRWMEPENQEKRNWRSSPLYSPFGGGARFCPGAELARLQIALFLHYFVTTYRWRQMKEDRMSFFPSARLVNGFQICLTRSSCLV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0015 486 SUPERFAMILY Cytochrome P450 41 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 281 307 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 372 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 416 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS E-class P450 group IV signature 70 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PANTHER CYTOCHROME P450 26 43 457 - -
Vvi16g0015 486 FunFam Cytochrome P450 720B1 family 33 482 - -
Vvi16g0015 486 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 Gene3D Cytochrome P450 35 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 CDD CYP90-like 77 481 - -
Vvi16g0015 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vvi16g0015 486 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0015 486 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0015 Vvi-Chr16 140769 143178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0015 11 481 Cytochrome P450 AT1G73340 70.551 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0015 - - vvi:100242623 979.548