Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0007 ATGGGGAAGACGCCGGTGAGGATGAAGGCGGTAGTGTACTCGCTATCACCGTTTCAGCAGCAGATCATGCCTGGTTTATGGAAGGATCTAACCACCAAAATCCACCACAAGGTCACCGAGAACTGGATCAGCGCCACTCTCCTTCTCGCTCCTCTCATCGGCACCTACTCATACGTTCAGAACTATCAGGAGAAGGAGAAGTTGGAGCATAGGTACTGA 219 0.516 MGKTPVRMKAVVYSLSPFQQQIMPGLWKDLTTKIHHKVTENWISATLLLAPLIGTYSYVQNYQEKEKLEHRY* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0007 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 10 65 IPR036642 GO:0005750|GO:0006122
Vvi16g0007 72 Gene3D - 2 72 IPR036642 GO:0005750|GO:0006122
Vvi16g0007 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
Vvi16g0007 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0007 Vvi-Chr16 96533 98049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0007 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 72.222 2.00e-37 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0007 - - vvi:100258030 151.754