Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g1135 | ATGGACTCAGAAGGACCGTATCGGCTTCTCCACTGCTCTAGTAAGTGTGATAAGGCAGGTGTGATACAAGAGTTGGAGAAAGGAGTAGAAGCCAACCTGGCTGACTATGATAAAAGAACAGCACTCCATTTAGCAGCCTGTGAAGGCTGTGAAGAAATTGTTGTCTTACTTCTTGAGAAAGGAGCTGATGCAAACCCCATTGATCGTTGGGGTCGCACTCCACTTTCAGATGCTCATAGCTTTGGTCATGAGAAGATATGTGAGATACTGGAGGCTCAGGGTGGAATAGATCCGGTATATACATTTTTAACGTGTAATAATGTGGGGCTTGACTCTAAGATTCCATGCTATGAAATTGATTATGCTGAGGTGGACATGGATGAAGCAACTCTTATTGGAGAAGGAGCATATGGTGAAGTTTATTTAGTGAGGTGGCGTGAAACAGAAGTTGCTGCAAATATAATTTATTCCTCCATTTCATCAGATCCAAGGGTGAAGAATACCTTTTTGAGGGAACTAGGTTTATGGCAGAAGCTGTGCCACCCTAATATAGTGCAGTTCCTTGGTTTTACAAAGCACTCTGATCGCCTTATTTTCGTCACTGAGTATCTTCGAAATGGAAGTTTGTATGATATTTTGAGCAAGAAAGGAAGACTTGATCCACCTGTAGTTGTGGCCTATGCTTTAGATATTGCAAGAGGGATGAATCATCTTCACCAGCTTAAACCACATTCTATAATTCACCGGGATTTGACTCCAAGAAATGTGTTACAAGATGAAGCAGGGCACCTTAAGGTTACAGTCTCCAGTCTATGCAAAATTGCTCAGGAAAAAGATGCAGTTGGTTACAAAATGACTGGAGGAACAGGTTCATGTAAGATTTTCCATCTTACTGAAAGTCAAACATTTTTTTGA | 915 | 0.412 | MDSEGPYRLLHCSSKCDKAGVIQELEKGVEANLADYDKRTALHLAACEGCEEIVVLLLEKGADANPIDRWGRTPLSDAHSFGHEKICEILEAQGGIDPVYTFLTCNNVGLDSKIPCYEIDYAEVDMDEATLIGEGAYGEVYLVRWRETEVAANIIYSSISSDPRVKNTFLRELGLWQKLCHPNIVQFLGFTKHSDRLIFVTEYLRNGSLYDILSKKGRLDPPVVVAYALDIARGMNHLHQLKPHSIIHRDLTPRNVLQDEAGHLKVTVSSLCKIAQEKDAVGYKMTGGTGSCKIFHLTESQTFF* | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g1135 | 304 | Pfam | Protein kinase domain | 129 | 275 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi15g1135 | 304 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 276 | IPR011009 | - | |
Vvi15g1135 | 304 | FunFam | serine/threonine-protein kinase STY46-like | 119 | 205 | - | - | |
Vvi15g1135 | 304 | SUPERFAMILY | Ankyrin repeat | 4 | 94 | IPR036770 | - | |
Vvi15g1135 | 304 | ProSiteProfiles | Ankyrin repeat profile. | 37 | 69 | IPR002110 | GO:0005515 | |
Vvi15g1135 | 304 | Gene3D | - | 2 | 93 | IPR036770 | - | |
Vvi15g1135 | 304 | ProSiteProfiles | Ankyrin repeat region circular profile. | 37 | 69 | - | - | |
Vvi15g1135 | 304 | PIRSF | ILK | 2 | 294 | - | - | |
Vvi15g1135 | 304 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 93 | 292 | - | - | |
Vvi15g1135 | 304 | ProSiteProfiles | Protein kinase domain profile. | 126 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi15g1135 | 304 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 294 | - | - | |
Vvi15g1135 | 304 | Pfam | Ankyrin repeats (3 copies) | 20 | 98 | IPR002110 | GO:0005515 | |
Vvi15g1135 | 304 | SMART | ANK_2a | 37 | 66 | IPR002110 | GO:0005515 | |
Vvi15g1135 | 304 | SMART | ANK_2a | 70 | 100 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi15g1135 | Vvi-Chr15 | 19572127 | 19576382 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi15g1135 | 4 | 278 | MAP Kinase Kinase Kinase | AT4G18950 | 41.007 | 4.93e-68 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-5 | Vvi15g1135 | Pkinase | 1.8e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g1135 | - | - | vvi:104881913 | 569.311 |