Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1133 ATGGCGGAGAGCAGTATCTCGTTTTTCGTAGAGAAGCTGTATGACTCGGTTTCACAACAAGCCTCACTCTATGGGGCAGTAGAAGGGCAGGTCAGGCTGCTCCGAAACGAGCTGGAGTGGATCCGCCAGTTCCTAGAATGTGCGGATGCAGAGCGTAGATACGACAAAATGTTCAAGCTGTGGGTGAATCAGATCAGGGATGCAGCCTATGATGCCGAAGATGCCATTGATGAATTCATATTCAAAGTGGAACGCAAACGACTGCAGAGATTCAATAATCTCAAGTTCCTCAACTTGTTACCCGCATGCGTGGTCTTGCCTGACAAGTTACGGCTTGTGAATGAGCTCAATGGGCGTATCAGTGAGACCAATATCACACTTGAGAAGATTTTGATTAATAAACGGAGGTACGGCATGGAAGATCTGAGAGCTTATGAACCTGGGAGCTCTTCCGGTATTGCAACTACTTCTGAACGGTACTCCAATCAAATGGTGGCCAGGAAAGAGAAGAGGATTCCCACTGTTGAAGAAACCAACGTTGTGGGGATGAAAAATGATGTGGAAGCTGTAAAGGGAAAGCTGTTAGAGGGAGCAATGGAAAGAGTAGTGGTGGCCATCTGGGGGATGGGTGGCCTTGGCAAAACTACTCTTGCCAAGAAAGTTTACAACCACAGCGATGTTCAGCACCACTTTAGTTGCCGTGCTTGGGTTTATGTATCTCAAGAGTACAATATTCGGGAGCTTTTGCTCGGGATCGCCAATTGCGTCACGACTCTCGAGGATGAACAAAAACGTAAAAATGAAAATGAGTTGGGAGAAGTGGTTAAAAAATGTCTCCAGGGAAAAAGGTACTTGATAGTACTTGATGATGTATGGAACACCGATGTTTGGCGCGGGTTGAGCTCATATTTTCCCGCAGAATCAAATAAGAGCAGAGTGTTGATCACTACTCGCAGAGAAGATATTGCTGTAGATGCTCATTCAGAGTGCTATAAACTTCAACTTCTGGGTGAAAAAGAAAGCTGGGAGCTGTTTCTCAACAAAGTAGGGAGTGAAGCAGTACTGACATGGCCAGGGTTGGAGGAATTCAAAAAGGAGATTGTAGCAAAATGCAAAGGTTTACCTCTTGCAATTGTGGTTCTTGGAGGACTTCTATCACTGAAAGATCTGACACCAGAATCATGGCGGAAAGTGCTTAAAACCATGGATTGGCATCTAAGTCAAGGTCCCGACTCCTGTTTGGGAATTCTTGCACTGAGCTATAACGACTTACCCACTTACTTGAAGCCCTGCTTTCTTTACTGTGGGGTTTTTCCGGAGGACTCAGAAATCAAAGCAAGTAAGTTGATTCGCTTGTGGGTTGCTGAAGGATTTGTACAAAAAAGGGGAAAAGAAACCCTGGAAGACATTGCAGAAGACTACCTATACGAGTTGATCCAGAGAAGCATGATTCAGGTGGCTGATACGAGAGACGATGGAAGGGTGAAGTCTTGCCGTATACACGACCTGCTTCGAGACCTTGCCATTTCAGAAGCTAAAGAAGAAAAACTTTTTGAGGTAGATGAAAACATTGATGTGGACGTGCCTCCTACTAGTGTTCGTCGACTGATCGGTAATATTGATCAGACCAACTCTCCACATTTGAAAAATTCTAATATCCGATCTTTGATCCTCAATAGATCCATTGATGGAGGAGATGAGGTATGTTTACATAAATGCCCCAAATTGCTTCGGGTCCTGCACGTGGACTCGCTTTACAAACTACCAGGAAAAATAGGAGAACTCATCCACCTAAAATATTTATGCTTAAGCGGAATTAAGTGGGGAATATTCCTTCCACCATCAATCGGTGGGCTTGTTAATTTACAAACCCTTGATTCAGGAGCGGAGTTCATCTGCATACCCCATACAATTTGGAAATTGAAGCAAATGAGACATCTAAATTGTTGGGGAGGTAGGATCTCATCAAGGCAGTCAATGAGAGAGAGGTGGGTGGAAGGCCATTTGGGTGTCCATCAAATGACCAACCTTCAGACATTATATTTAGAGGGTGGCGATTGGTTGAAGGATAACAACTTGGGAAAACTGGCCCACCACCTAAAGCAATTGAAGCTAGACCTTTATTCTCACCCAAAGTTGAAGGAGGGGTCGTTCCGATCAATAGCCCAATTAACTGGGCTTCAAAAGCTGAAGTTGCTTACTGATAAATTTATAGAAAGCGAGGGATTGTCAACATCAACACCAATTCTATTCCCAGGTCTGGAGTCTTTCTCACACCACAAGTGCCTCTACAAACTGCGTCTAGTGGGACCCATCCGAAAACTACGCGTGGAAACAACACTCTATCCTCCGAATCTCATGCAACTCAAACTGTTTCGTACTAGAATGGAGGAAGATCCAATGCCAATACTAGGGAGGCTGCCAAACTTGAGGATTCTCACATTATTACGAGATTCTTATAAGGGTACGGGAATGAATTGTCCTCATGGAGGGTTCCTTCGACTTGAATTCCTACAAATGCGCTTGTTGGACAATCTAGAAGACTTGTCAGTGGAGGAAGGAGCAATGCCTAATCTGAAGACATTGAAAATTGAGTATTGTGACCAAATGAGGAAGTTCCCAGATGGATTATTGCAGCTGAAAAAGCTCCAAAGACTAAACCTCTATCCGGTATCCCAAGAATTGATGAGTGGGGTTTTAGAGACACAAGGAGAAGATTGGAAAAGGATCCGTCGTATAATCACCTCCCAGGTACCTCCCTGA 2763 0.4434 MAESSISFFVEKLYDSVSQQASLYGAVEGQVRLLRNELEWIRQFLECADAERRYDKMFKLWVNQIRDAAYDAEDAIDEFIFKVERKRLQRFNNLKFLNLLPACVVLPDKLRLVNELNGRISETNITLEKILINKRRYGMEDLRAYEPGSSSGIATTSERYSNQMVARKEKRIPTVEETNVVGMKNDVEAVKGKLLEGAMERVVVAIWGMGGLGKTTLAKKVYNHSDVQHHFSCRAWVYVSQEYNIRELLLGIANCVTTLEDEQKRKNENELGEVVKKCLQGKRYLIVLDDVWNTDVWRGLSSYFPAESNKSRVLITTRREDIAVDAHSECYKLQLLGEKESWELFLNKVGSEAVLTWPGLEEFKKEIVAKCKGLPLAIVVLGGLLSLKDLTPESWRKVLKTMDWHLSQGPDSCLGILALSYNDLPTYLKPCFLYCGVFPEDSEIKASKLIRLWVAEGFVQKRGKETLEDIAEDYLYELIQRSMIQVADTRDDGRVKSCRIHDLLRDLAISEAKEEKLFEVDENIDVDVPPTSVRRLIGNIDQTNSPHLKNSNIRSLILNRSIDGGDEVCLHKCPKLLRVLHVDSLYKLPGKIGELIHLKYLCLSGIKWGIFLPPSIGGLVNLQTLDSGAEFICIPHTIWKLKQMRHLNCWGGRISSRQSMRERWVEGHLGVHQMTNLQTLYLEGGDWLKDNNLGKLAHHLKQLKLDLYSHPKLKEGSFRSIAQLTGLQKLKLLTDKFIESEGLSTSTPILFPGLESFSHHKCLYKLRLVGPIRKLRVETTLYPPNLMQLKLFRTRMEEDPMPILGRLPNLRILTLLRDSYKGTGMNCPHGGFLRLEFLQMRLLDNLEDLSVEEGAMPNLKTLKIEYCDQMRKFPDGLLQLKKLQRLNLYPVSQELMSGVLETQGEDWKRIRRIITSQVPP* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1133 920 FunFam Probable disease resistance protein At1g61300 163 329 - -
Vvi15g1133 920 Gene3D Ribonuclease Inhibitor 750 899 IPR032675 -
Vvi15g1133 920 Gene3D Ribonuclease Inhibitor 523 748 IPR032675 -
Vvi15g1133 920 Pfam Rx N-terminal domain 6 88 IPR041118 -
Vvi15g1133 920 Gene3D - 336 420 IPR042197 -
Vvi15g1133 920 Gene3D - 5 115 - -
Vvi15g1133 920 Gene3D - 158 335 IPR027417 -
Vvi15g1133 920 FunFam Probable disease resistance protein At1g63360 421 510 - -
Vvi15g1133 920 Pfam NB-ARC domain 184 407 IPR002182 GO:0043531
Vvi15g1133 920 PRINTS Disease resistance protein signature 854 870 - -
Vvi15g1133 920 PRINTS Disease resistance protein signature 278 292 - -
Vvi15g1133 920 PRINTS Disease resistance protein signature 203 218 - -
Vvi15g1133 920 PRINTS Disease resistance protein signature 371 385 - -
Vvi15g1133 920 CDD RX-CC_like 2 100 IPR038005 -
Vvi15g1133 920 SUPERFAMILY L domain-like 499 889 - -
Vvi15g1133 920 PANTHER DISEASE RESISTANCE PROTEIN RP 35 868 IPR044974 GO:0006952
Vvi15g1133 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 435 IPR027417 -
Vvi15g1133 920 Gene3D - 421 511 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1133 Vvi-Chr15 19559843 19562605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1133 204 508 WRKY Transcription Factor Family AT5G45050 25.879 9.66e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1133 - - vvi:100258459 1837.77