Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1126 ATGGCAGAAAGCAGTGTGGCCTCTTTTCTAGAGAAGTTGCGCAACTTGGCTTCACAAGAAGCTTCTCTATTTGGAGAGGTAGAAGGGCAGGTGAGGCTGCTGCGTAACGAGCTGGAGTGGATGCGCCTCTTCCTGGAATATACTGATGCAAGACGCAGATACGATAAACGGCTCAAGCTCTGGGTGAATCAGATCAGAGATGCAGCTCATGATGCCGAAGATGTCCTCGATGAATTCATGTTCAAGGTGGAACACAAGCGCCAGCAGAGACTCCATAGACTCAAGTTCCTCAGATTCTTACCTTCATGTGTTAGCGTCGCTGACAAGCTACCATTTATCCACGAGCTCAACGATCGTATAACCGAGATCAATATCACCATCGAGAAGATCTTGGCCAATAAAAAAAGGTACGGCATTGAAAATCCCAGCACTTCTAAAGCTTGGAGCTCCTCCAATGAAGTGCCATGTAAGGAGAAAACGCTCCCCGTTGTTGAAGAAATTGATGTGGTGGGGTTCGAAACAGATGTGAAATCTGTAAAGGAATTGCTTGTTGAGGCTGGAGAGACAACAGAAACGCGGAGAGTAGTGGTGTCTATAGTGGGCATGGGTGGCCTTGGCAAGACGACTCTAGCTAAGAAAGTCTACAATGATGTGAAACAGCATTTTGATTGTGATGCTTGGGTTTATGTTTCTCAAGAGTATAGAACCCGAGATCTTTTATTCGAAATTCTGAATTGTGTGACGAATGATAAAAGAATCATGACAGAATTAGATAGTGAAGCCGCGGTGGGGATCGAACTTCGTAATTTCCTGAGCACCAAAAAGTATTTGATAGTCATGGATGATATTTGGTGCACACAAGTTTGGAAGGGTTTAAATGTTTATCTCCCAATAGAGGGATATGGAAGTAGAGTGCTAATTACAGCACGAAACAAAGAAGTTGCTTTGCATGCCAATTCACATCTCCATGAACTCCATCCTTTGAATGAAATGGAGAGTGAGGAGCTTTTTCTCAGGAAGATGGGAAGCAGCACCTTGGTTTGGCCTCAAGGGTTGGAGAAATTAGGGAAGGAGATTGTAGCAAAATGCAAAGGCCTACCCCTTGCTACTGTGATGTTGGGAGGCCTTCTATCAATGAAAGAGAAGACCCAATTCTCATGGCAAAAGGTACTTCATAGCAAAGATTGGCATTTGAGTCAAGGTCCCAACTCATGTTTGGGAATTCTCGCTTTAAGTTATAATGACTTGCCCAATTACTTAAAGTCGTGCTTTCTGTATTGCGGTATTTTCCCAGAAAACTCAATAGTCAAATCAAGTGAATTGATCCGGCTGTGGATTGCTGAAGGATTCGTACAAACTAGGGGAGCAGAAACACTGGAAGACCTGGCCGAGAACTACTTATACGAGCTCATCCAAAGAAACATGATTCAAGTGGATAAGAGGGACAGGCTAGATGGAAGAGTGAAATCTTGCCGCATGCATGATTTCCTTCGAGACCTCGCCATTTCAGAGGCCAAAGACGCCAAACTTTTTGAGGTACATGAAAACATTGATGTTAGATATCCTATTAGCTCTCATCGGCTTAGCATTCAACAGAGTCTTATTAAGAAAAATATATCTCAGCATTTGCATAACTCACGCCTCCGGTCATTGATTTTTTTGTCTGAACCCTTGCAAGAAAACAGTTGGACATATTTGCAAGAACACATCAAATTACTTCAGGTGTTGGATTTAGGAGTGTGCCAGTATCAGAATATTTACACGCTCCCAAGAAAAGTAGGAGAACTCATAAACTTGAAATATATGTGTTTAAGGGGGGCTGGGAATAGAATAAGGCTTCCAACACCCATTGTTAGGCTCGTTAATTTGCAGACTCTCGACTTAGACGGCAATCTTCTATGTCTTCCTTGCAAAATCTGGAAACTACATCAATTGAGACATTTAAATTGTCCTGGTGGGATAGTTTCAAGGAAGTCATTTACAGAGAGGTTCTTCATTAATGGTGATTTGGGTGTCCATCAATTGACTAACCTTCAAACATTAGCTTTACAAGGGGGCGAATGGTTGGAGGGTGATGGCTTAGGGCAACTGACCCAGCTCAGGCAGCTCAAGATAATGGGAGGCTTGACTCCTTATTTGAAGGAGGGGTTTTTCAAATCTATAGCCCAATTGACAGCACTAGAAAACCTGAAGCTCATAAACTTTTCTTCTAAAAGGAAAACAATAGTCTCTGGTTTCATGTCTTTCTCACACCACACCCGTCTCCAAAAATTGGTTTTAGGAGGAAGGCTCGAGAAATTACCAGTAGATACTGGGTTCTACCCTCCAAACCTCCTGCAACTCAAGCTGTGGGAGACTGAGTTGGAACAAGATCCAATGTCGATTCTAGGGGAGCTCCCAAACTTGAGGATTCTCAAATTACTCTGGAACTCGTATGTAGGAAAGAAAATGAATTGCTCGGAGGGAAGATTCCACCAACTTGAGTTCCTGCATATGGAGCATCTGTCCAATCTGGAGGACCTCACTGTAGAGGAAGGGGCAATGCCTAAGCTGAGGACTTTACAGATGGAGTGGTTCTGGAAAATGAAGAAGTTTCCTGATGGGCTGTTAGGGCTAAGAAACCTGCAGGAACTGAACCTCCTCCATTGCTCCAATGAATTGTTGAAAGAGGTTTTCCAGACACAAGGAGAAGATTGGAATAGGATCCGTCTTATCACCTCCCAGACACACCCAATTTCGGATAACACCAGCATCATCCTCCTTGATGACATTGGCTTTCACTGA 2784 0.4339 MAESSVASFLEKLRNLASQEASLFGEVEGQVRLLRNELEWMRLFLEYTDARRRYDKRLKLWVNQIRDAAHDAEDVLDEFMFKVEHKRQQRLHRLKFLRFLPSCVSVADKLPFIHELNDRITEINITIEKILANKKRYGIENPSTSKAWSSSNEVPCKEKTLPVVEEIDVVGFETDVKSVKELLVEAGETTETRRVVVSIVGMGGLGKTTLAKKVYNDVKQHFDCDAWVYVSQEYRTRDLLFEILNCVTNDKRIMTELDSEAAVGIELRNFLSTKKYLIVMDDIWCTQVWKGLNVYLPIEGYGSRVLITARNKEVALHANSHLHELHPLNEMESEELFLRKMGSSTLVWPQGLEKLGKEIVAKCKGLPLATVMLGGLLSMKEKTQFSWQKVLHSKDWHLSQGPNSCLGILALSYNDLPNYLKSCFLYCGIFPENSIVKSSELIRLWIAEGFVQTRGAETLEDLAENYLYELIQRNMIQVDKRDRLDGRVKSCRMHDFLRDLAISEAKDAKLFEVHENIDVRYPISSHRLSIQQSLIKKNISQHLHNSRLRSLIFLSEPLQENSWTYLQEHIKLLQVLDLGVCQYQNIYTLPRKVGELINLKYMCLRGAGNRIRLPTPIVRLVNLQTLDLDGNLLCLPCKIWKLHQLRHLNCPGGIVSRKSFTERFFINGDLGVHQLTNLQTLALQGGEWLEGDGLGQLTQLRQLKIMGGLTPYLKEGFFKSIAQLTALENLKLINFSSKRKTIVSGFMSFSHHTRLQKLVLGGRLEKLPVDTGFYPPNLLQLKLWETELEQDPMSILGELPNLRILKLLWNSYVGKKMNCSEGRFHQLEFLHMEHLSNLEDLTVEEGAMPKLRTLQMEWFWKMKKFPDGLLGLRNLQELNLLHCSNELLKEVFQTQGEDWNRIRLITSQTHPISDNTSIILLDDIGFH* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1126 927 Coils Coil 113 133 - -
Vvi15g1126 927 Gene3D - 413 499 IPR036388 -
Vvi15g1126 927 FunFam Probable disease resistance protein At1g63360 413 503 - -
Vvi15g1126 927 Gene3D - 327 412 IPR042197 -
Vvi15g1126 927 PANTHER DISEASE RESISTANCE PROTEIN RP 34 841 IPR044974 GO:0006952
Vvi15g1126 927 Gene3D - 5 116 - -
Vvi15g1126 927 Pfam NB-ARC domain 173 413 IPR002182 GO:0043531
Vvi15g1126 927 Gene3D Ribonuclease Inhibitor 719 895 IPR032675 -
Vvi15g1126 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
Vvi15g1126 927 Gene3D Ribonuclease Inhibitor 500 709 IPR032675 -
Vvi15g1126 927 PRINTS Disease resistance protein signature 270 284 - -
Vvi15g1126 927 PRINTS Disease resistance protein signature 363 377 - -
Vvi15g1126 927 PRINTS Disease resistance protein signature 196 211 - -
Vvi15g1126 927 PRINTS Disease resistance protein signature 568 584 - -
Vvi15g1126 927 FunFam Probable disease resistance protein At1g61300 153 322 - -
Vvi15g1126 927 Gene3D - 151 325 IPR027417 -
Vvi15g1126 927 CDD RX-CC_like 2 130 IPR038005 -
Vvi15g1126 927 Pfam Rx N-terminal domain 6 89 IPR041118 -
Vvi15g1126 927 SUPERFAMILY L domain-like 492 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1126 Vvi-Chr15 19504579 19507362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1126 197 509 WRKY Transcription Factor Family AT5G45050 24.169 2.01e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1126 - - vvi:104881947 1853.57