Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1099 ATGATGGGAAAGAGATCGCAGAGGCGCCCTGTGCGATATGAAAAAGGTCAGTCGGGCTGCATGTGGAGTTTGATTAATATGTTTGACTTCCGCCATGGTCGATCCACTCGGAGGCTTCTGTCAGATAGGAAGCGTGACAACTGGCAGGCTGTCGGCGAAGGATATTCAAAGGGTACATTTAGCTTGTTGACCGACTTTGATGAGAAATGTCAAGGCACTGATGATGGGGATGAGTGCCAGATGGTGACAGCTGATTCTTGTAAACCAAGCATGAAAAAACTCATAGAGGAAGAGATGTCAAACGAGGAGGAAGTGAAGAAGCAGATGACCAGTGATGAAGTAGAACCAAAACAATCCGATCCAGAAAAAGGAGACCCCATAAGAAAGAATCGAAGAAGAATAAACAAAAGCAAGAAAACATGCAATGTGCACATCCACAATAATGCTGGATCGGGAAATTTGTCTAATTACAATTCAGAGCAACAATTTATGAGTAGTCTTGATCTAGATGCAATAATGGAAGAGCTCTGTGGCCAGATCCATCAGAAAAGTTCTACTTGTGGGAGGCATGACCATCATGGTGAACATAACATGCAGCCGGATAAGAGGTGTCCTGCTTCCGAGGAAAAGTTAAGTGAGGCAACTAAGGTGTTTATAAGTCAGAAGTTTGCTACTGGGACTGCTGAAGACGGGAAGACGGAGAATTCCCAAGAGTTCACAGATGCGCTTCAGACATTAAATTCAAACAAAGAACTGTTTCTGAAACTCCTACAAGACCCAAACTCGCTGTTGATGAAACACATTCAGAACTTGCTGGATTCTCAGGTAGAGAAAGATGAAAATTCCATGTCACATGAAAATTCCAATTCACATAAATATTCCAAATCACTGCCAGGATCCAACTTACCAGATCGAGAGCTCTTGAATTTGAAACAGTCCAAGGAGTTTACCAATCATAAGCAGCATAAATTTTTCAGGAGAAGATCAAAGTCTCAGGACAGTATCTCATTGAATGGAAACGAGAATTACCAAGCTTCCAATAAAATAGTCATTTTGAAGCCTGGACCTGTAGACTCAAGAAATTCTGAAACAGACAACGGTTTTGGGTCCTTGATGCAATCTCACAACGACATGACAAATACAGGGCCGAGTGAGAGAACCGTTTCCCATTTTTCTCTTAATGAAATAAAAAGAAGGTTGAAGCATGCCATGGGAAGAGAGCGGCAAGGGACCGCTCATAATGGTGTTTTACATAGATTTCCATCCAATCATCAAAGTTCAGAAGATGGCAATAAACGGGTTAGTGGTGAGAATATTGGTATGCATTCTCCAAATAGAAGCCACTTCTATACTGAAAGAATCCCGAAACCTTCTGCTGGCAGCAAGAGGGGAGATAAAATTGGCAAGCTGAAAGACTGTGAAATAAGTATGGAACATGACACTTTGGGCTATCCCAACCAAAGGGTATCTACCATCTACTCCGAGGCCAAGAAACATCTTTCTGAGATGCTGAGTAATGGGGATGAAGATGAGGATATTTTGATCCGACAGGCTCCGAGAACACTGGGAAGGATACTCTCTCTTCCCGAGTACAACCTTTCACCCATTTGCAGCCCTGGGAGGGACTGGGGTAATAACTTTGTTACTGCACAGATGAGATTTTCTGCTTGTGGGAAGTTTCAGAGGGTAGACGAGAACACAGGACGGCTCAAGCAAGAAAACAATGTCGGTCATTCAACTCCATTGGCACAAAACTTCAAGAATCGGACCTACCCTTCCGATGAGAACCAGGATGATGAAGCACAGGGTTCTAACTCAAGTCCCAATATCTCAGTTGAGTTCGTTCATGATAACAAAGTGAAAGAAGCCTGTTCTACTAGAGATGAGATAAGTTCTGAAGGTGATGTGGAGATTGTAAAAACAATTAATACACTTCTAGAGGAGAACAGAGTCTTGGATATTTCCTCTGAATCAAGTAGCTCCTCTGTTATCAAAGATGATCAAATGGAATGCATTGCAGCTGAAAGTTGTGATGAAAAGGGATATATTGAAAGCTTGAAATCAGATTCTGTTGAAGAGGATCAACGGCAATCTTCTCCATTGGCATCCCCATCAAGCTCTCTGATGGACAAAGGGGTTGTAGATTTAGCGAGCATCATGGATAGAATAGAGAGGCCAAGTCCCATATCTGTTCTTGAGCCTTTATTCACAGAAGATGACATCAGCCCTGCAAGCATCAAATCTAAACCCGTTGAACAACTAATGCAACCACTACGAATCCAATTCGAAGAACAGGATGCTTCTGCTGCACATCTAGTTACCCATATTAAAATTGGTGTGGAGAGTAAGGACTCTGTGTTTGAGTACATAAAAGCAGTCCTGCAAATCTCTGCCTCAAGCTTGGACGAATTCTTCCTGATGTCCCTTACTTCAGATCAGATTCTTGACCCGTCATTGCTTGATGAAGAAGAGATATCTTCCTTCCAACTTTGCCATGACCAAAAGCTCCTGTTCAATTGTATTAATGAAGTTCTCATGGAGGTATGTGAGCGCTATTTTGGTTGCTTCTCTTGGGCATCAATTGTAAAGGCAAATATAAGACCAGTCCCAAACATGAAGAACACCATTCGTGAGGTATGGGAAGGAGTTCACTGGCATCTCCTTCCCCAACCTCTACCTCATAACTTGGACCAGATTGTCAGAAAAGACATGGTGAAAACTGGAACATGGATGGATCTTCGATTTGAAGCCCAAATTATTGGTATTGAAATGAGTGAAGTGGTCCTCCAAGAATTAGTGGAAGACACCATATTGTGCTGCATAAATGAAAGTTCAGAAAATGTATTCACAATGCCTCAAGCTGACTTGGAGGAAGATGAAAGCAGTGTCAATCTGTCAAATACGACATCCTGTTAG 2916 0.4228 MMGKRSQRRPVRYEKGQSGCMWSLINMFDFRHGRSTRRLLSDRKRDNWQAVGEGYSKGTFSLLTDFDEKCQGTDDGDECQMVTADSCKPSMKKLIEEEMSNEEEVKKQMTSDEVEPKQSDPEKGDPIRKNRRRINKSKKTCNVHIHNNAGSGNLSNYNSEQQFMSSLDLDAIMEELCGQIHQKSSTCGRHDHHGEHNMQPDKRCPASEEKLSEATKVFISQKFATGTAEDGKTENSQEFTDALQTLNSNKELFLKLLQDPNSLLMKHIQNLLDSQVEKDENSMSHENSNSHKYSKSLPGSNLPDRELLNLKQSKEFTNHKQHKFFRRRSKSQDSISLNGNENYQASNKIVILKPGPVDSRNSETDNGFGSLMQSHNDMTNTGPSERTVSHFSLNEIKRRLKHAMGRERQGTAHNGVLHRFPSNHQSSEDGNKRVSGENIGMHSPNRSHFYTERIPKPSAGSKRGDKIGKLKDCEISMEHDTLGYPNQRVSTIYSEAKKHLSEMLSNGDEDEDILIRQAPRTLGRILSLPEYNLSPICSPGRDWGNNFVTAQMRFSACGKFQRVDENTGRLKQENNVGHSTPLAQNFKNRTYPSDENQDDEAQGSNSSPNISVEFVHDNKVKEACSTRDEISSEGDVEIVKTINTLLEENRVLDISSESSSSSVIKDDQMECIAAESCDEKGYIESLKSDSVEEDQRQSSPLASPSSSLMDKGVVDLASIMDRIERPSPISVLEPLFTEDDISPASIKSKPVEQLMQPLRIQFEEQDASAAHLVTHIKIGVESKDSVFEYIKAVLQISASSLDEFFLMSLTSDQILDPSLLDEEEISSFQLCHDQKLLFNCINEVLMEVCERYFGCFSWASIVKANIRPVPNMKNTIREVWEGVHWHLLPQPLPHNLDQIVRKDMVKTGTWMDLRFEAQIIGIEMSEVVLQELVEDTILCCINESSENVFTMPQADLEEDESSVNLSNTTSC* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1099 971 Pfam Protein of unknown function (DUF3741) 223 262 IPR022212 -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 319 339 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 441 466 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 99 129 - -
Vvi15g1099 971 Pfam Domain of unknown function (DUF4378) 787 935 IPR025486 -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 99 139 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 572 611 - -
Vvi15g1099 971 Coils Coil 92 112 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 688 707 - -
Vvi15g1099 971 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 2 940 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 568 611 - -
Vvi15g1099 971 MobiDBLite consensus disorder prediction 277 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1099 Vvi-Chr15 19276122 19279929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1099 2 925 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.446 1.41e-122 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1099 - - vvi:100258456 1909.03