Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1091 ATGGAGGGGAAGGAAGAGGATGTGAGGTTGGGGGCCAACAAGTTTGCAGAGAGGCAACCGATAGGGACATCAGCACAGACAGACAAGGACTATAGGGAGCCTCCACCAGCTCCACTGTTTGACCCTGGTGAGCTTCATTCATGGTCGTTTTGGAGAGCTGGGATTGCCGAGTTCATGGCCACCTTCATCTTTCTCTACATCATCATCTCGACTATTATCGGTGTTGTCAAGTCCCCCAACAAGTGTGCTACTGTTGGTTTTCAGGGTATTGCTTGGGCTTGTGGGGGTATGATCTTCGTTCTTGTCTACTGCACTGCTGGTATCTCAGGAGGGCACATAAACCCAGCGGTGACATTTGGGCTGCTCTTGGCAAGAAAGCTGTCCCTAACCCGAGCCGTGTTCTACATGATCATGCAGTGCCTGGGTGCCATCTGTGGCGCAGGTATGGTGAAGTGGTTCCAGAGACATGACTTTGAGACGCTGGGTGGTGGAATCAATGCTGTGGCTTCTGGCTACTCCAAGCTTGCTGGGCTTGGTGCTGAGATAGTTGGCACTTTTGTTCTTGTCTACACTGTTCTCTCTGCAACTGATGCCAAGAGAAATGCCAGAGACTCACATGTTCCAATTTTGGCTCCTCTCCCGATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTCGGGGCCGCCATCATCTACAACAGGGGGAATGCCTGGGATGACATGTGGATTTTCTGGGTTGGACCCTTCATTGGAGCTACTCTGGCTACCTTGTACCACCAGATAGTCATCAGAGCTATCCCATTCAAGACCAGAGCCTGA 861 0.518 MEGKEEDVRLGANKFAERQPIGTSAQTDKDYREPPPAPLFDPGELHSWSFWRAGIAEFMATFIFLYIIISTIIGVVKSPNKCATVGFQGIAWACGGMIFVLVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMIMQCLGAICGAGMVKWFQRHDFETLGGGINAVASGYSKLAGLGAEIVGTFVLVYTVLSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGNAWDDMWIFWVGPFIGATLATLYHQIVIRAIPFKTRA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1091 286 SUPERFAMILY Aquaporin-like 44 278 IPR023271 -
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 281 IPR034294 -
Vvi15g1091 286 MobiDBLite consensus disorder prediction 1 34 - -
Vvi15g1091 286 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Vvi15g1091 286 CDD MIP 52 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Vvi15g1091 286 NCBIfam MIP family channel protein 56 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi15g1091 286 FunFam Probable aquaporin PIP1-2 37 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1091 Vvi-Chr15 19192846 19196041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1091 1 286 Major Intrinsic Protein MIP AT3G61430 81.119 3.62e-168 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1091 K09872 - vvi:100265390 578.17