Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1088 ATGGACGTGTTTTGGGCTTCGCTGTTTTTTATGGCGATCACCGCTTATCTGCTGTGGTTCACCTTCATCTCACGGTCGTTGAGGGGTCCACGTGTCTGGCCTTTATTGGGCAGCTTACCAGGCTTGATCGAGAACAGTGAACGCATGCATGAATGGATCGCTGAAAATCTACGCGCGTGTGGCGGCACGTACCAAACATGCATCTGCGCCGTCCCTTTCTTGGCGCGAAAGCAAGGGCTCGTGACGGTCACATGCGACCCGAAGAATCTGGAGCATATATTGAAGACCCGGTTCGATAATTACCCTAAGGGTCCCACGTGGCAAGGTGTATTTCATGATCTGCTCGGGGAAGGGATCTTCAATTCTGATGGCGACACGTGGCTGTTTCAGAGGAAGACCGCCGCACTGGAATTTACCACCCGGACGCTGCGTCAGGCCATGGCTCGCTGGGTCAGTCGAGCCATCAAGCACAGGTTCTGCCCCATTCTCAGGGCGGCTCAGCTAGAAGCCAAGCCAGTTGATCTTCAGGACCTTTTGCTTCGGATCACGTTCGATAACATTTGCGGCTTGACGTTTGGGATGGACCCGCAAACCCTAGCTCCAGGCCTCCCTGAAAACAGCTTCGCCTCTGCTTTTGACCGAGCCACCGAAGCCAGCCTCCAGCGATTTATTTTGCCTGAGGTTATGTGGAAGCTGAAGAAGTGGCTTGGGTTGGGCATGGAGGTCAGCTTGAGCCGAAGCATTGTACACGTGGAGAATTACCTGTCCAAAGTCATCAATACACGTAAGGTGGAGCTGCTGAGTCAGCAAAAAGACGGAAACCCCCACGACGACTTGCTCTCAAGATTTATGAAGAAAAAGGAATCCTACTCAGACTCCTTCCTCCAACACGTGGCACTCAACTTCATCCTAGCTGGACGTGACACGTCATCAGTAGCCTTAAGCTGGTTCTTCTGGTTGGTAACCCAGAACCCAACTGTCGAAAAGAAAATCCTACACGAAATCTGCACTGTTCTGATGGGGACACGTGGCAGCGACACGTCAAAGTGGGTTGATGAGCCGTTAGAGTTTGAAGAGCTGGACCGTTTGATATACCTCAAAGCCGCACTCTCCGAGACTCTCCGGCTCTACCCGTCGGTGCCGGAGGATTCAAAGCATGTTGTCGCCGACGACATATTACCGGACGGCACTTTCGTCCCGGCGGGATCATCAATCACGTACTCAGTATATTCATCGGGTAGGATGAAATCCACGTGGGGTGAAGACTGGCCCGAGTTCAGGCCTGAGAGGTGGCTATCGGCCGACTGCCAGCGATTCATATTGCACGACCAATACAAGTTTGTGGCGTTCAATGCGGGGCCGAGGATTTGTTTGGGGAAGGACTTGGCTTACTTGCAAATGAAGTCGATAGCCGCGTCGGTGTTGCTGCGCCACCGCCTCACGGTGGTTGCCGGCCACCGGGTGGAGCAGAAGATGTCGCTGACGTTGTTCATGAAGTATGGGCTCAAGGTTAACGTGCATGAAAGAGATTTAACGGCAGTTGTGGACGGCGTTAGGAACGAGAAAGCAAGTGAGGTGTGTGGCGAGGAAGCTGTTAGAGTTAAATGTAACGGTAACTGTCACGCCAGTGGTTCGGTTGTTGTTGGGGGTAGCGACGTGCGGCTCGCAGCCCAACAGTTTTTAAGGCCCAATTACGCTTGA 1701 0.5309 MDVFWASLFFMAITAYLLWFTFISRSLRGPRVWPLLGSLPGLIENSERMHEWIAENLRACGGTYQTCICAVPFLARKQGLVTVTCDPKNLEHILKTRFDNYPKGPTWQGVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILRAAQLEAKPVDLQDLLLRITFDNICGLTFGMDPQTLAPGLPENSFASAFDRATEASLQRFILPEVMWKLKKWLGLGMEVSLSRSIVHVENYLSKVINTRKVELLSQQKDGNPHDDLLSRFMKKKESYSDSFLQHVALNFILAGRDTSSVALSWFFWLVTQNPTVEKKILHEICTVLMGTRGSDTSKWVDEPLEFEELDRLIYLKAALSETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSITYSVYSSGRMKSTWGEDWPEFRPERWLSADCQRFILHDQYKFVAFNAGPRICLGKDLAYLQMKSIAASVLLRHRLTVVAGHRVEQKMSLTLFMKYGLKVNVHERDLTAVVDGVRNEKASEVCGEEAVRVKCNGNCHASGSVVVGGSDVRLAAQQFLRPNYA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1088 566 FunFam Cytochrome P450 21 512 - -
Vvi15g1088 566 PANTHER CYTOCHROME P450 19 504 - -
Vvi15g1088 566 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vvi15g1088 566 CDD CYP86A 67 502 - -
Vvi15g1088 566 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 Pfam Cytochrome P450 28 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 SUPERFAMILY Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g1088 566 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1088 Vvi-Chr15 19173918 19175678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1088 1 526 Cytochrome P450 AT2G45970 77.799 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1088 K15398 - vvi:100249915 1117.83