Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1034 ATGTCACTAATTTTCTGTTTCTTAGTTGTTTTTCCTCTAATTTTGGCGGTGGAAGGTCAGGCCGGTGAGGTTTTGATCACTGGCAACAAGACGATTCTGAGTGAGAATGGGACCTTCAAGATGGGGTTCTTCAGCGCCAATGGCGGACCCAACTGGTACTTGGGCATCTGGTACGCTTCTCTTCCTACCCCGACCTACGTGTGGGTGGCGAACCGCGAGACGCCGGTGAAAAGTGTGGAGTCGGCGACAGTGGAGTTGGGTGGAGATGGGAGGTTGAAGATAATGGAGGTCGGTGGCTCCGTGGTGTGGCAAACGACGAATGTGGAGAAGTCGACGGCAGTGAAGCTATTGGAGAGTGGGAACTTGGTGTTGTTATCGCGTAAAGAAAAGGTGGTGTGGCAGAGCTTCGATTTTCCGGCGGATACGTGGCTGCCGGGGATGAATATGACGGCGCATCGATCGATAACGTGTTGGAAGAGCTCCGTGGATCCCTCACCGGGATCCTACTCTCTCCGGCTGAAACCGCCGGACTACGGTGAGTTCGAGCTCGTGTTTAATGGAACTATGATGTATTGGTCCACCGGAAACTGGACCGGAGATAGGTTCGCCGGAGTGCCGGAGATGACGATTCCGTACATCTACAAGTTCCGCTTCTTGCACCCGTTTACTCCTGCTGCGGCGTTCTGGTACACGGCGACGGCGCTGGAGAACAGCGGCGGAGGAGGGCGGCCGCCGCTAAACCGCTTCCACGTGGACTCCTCTGGTCTCCTCCGGCAGTACACGTGGTTTCCTCAGACCGACACGTGGAACATGTTCTGGTCACAGCCGGAGAACCGCTGCCGGGTGTACGGACTCTGTGGGAATTTAGGCCTCTGCAACACTGTAACGTTGAAGCCCTGTGAATGTCTCGCCGGTTTTCAACCATCCGACGAACTAAGCTGGAGCTCCGGTGACTTCTCCGGCGGATGCCTCCGTGAGGACAACAATGTGTGTAGCGAGACCGATGGCGGGTTCGAAGGAATTGGCAGTGTTAGCTTCAATGGAGCTGCTCTGGTTCCGATTCCGGGAAATTCGAAATCTTGTGAAGCTTCGTGTTTGATGAATTGCTCCTGTATCGGTTTGTATCGAAATGCGAGGTCCAATTTGTGCTACAATGTATATGGGCCTGTCTTGAATCTGAAGAACTTGTCTTCAGATAGCACAGAAGAAGGCGAATTACACGTTAGAGTACACAGACGAGGAAACGGGAAGAAGAACAAATGGAAATGGCCTGTTTTGATAGCCTGCGTTGCTGGGTTTTCAATCATTCTGGGGTTATCAATGGCGGTTTTGCTGGTTTTCCGAAAGAGAAGACAGAGGAAGAAGAAGGTAGAGGAAGAGGATGTGTTCTCAGTAACCAATTTGAGGGTCTTCTCCTACAAAGAGCTCAACGCAGCTACTCAGGGTTTCTCCGAGAAGCTCGGGCATGGAGGTTTCGGCACTGTATTTAAAGGAGAATTGTCGGATTCTTCGCAGGTGGCGGTGAAACGGCTGGAGAGGCCGGGTGGGGGAGAGAAGGAGTTCAGGGCAGAGGTCTGCACAATTGGGAATATCCAGCATGTTAATCTAGTGAGGCTCAGGGGCTTTTGCTCGGAAAATTCGCATCGGCTTCTGGTTTATGATTGTATGCAGAATGGTCCTCTGAGTGTGTATCTGAGGCGAGACGGTGAGAATTTGAGCTGGGATGTTCGGTTCAGGGTGGCCATTGGGACGGCCAGAGGCATTGCATACCTGCACGAAGAATGCAGAGATTGTATCATACATTGTGATATTAAGCCTGAAAACATTCTTTTAGACTCTGATTTCATTCCAAAGGTGTCGGATTTCGGGTTGGCGAAGCTGATGGGGAGGGACTTCAGTAGGGTTTTAGCCACAATGAGGGGGACATGGGGCTATGTCGCCCCTGAATGGATATCAGGTGTGGCGATTACTGCAAAAGCCGATGTGTACAGCTATGGAATGACACTGTTGGAGCTAATTGGGGGCCGGAGGAATGTGGAAACCCCGCCATCCGCGGGAGGTGGTGGTGCTGCTGCTACAGGGGATGAGTGGTTCTTCCCTCCCTGGGCTGCCCGACAGATAATTGAGGGCAATGTGGCGGCAGTGGTGGACGAAAGACTCAGGGATTCATACAACACTGCAGAGGCCGAGCGGGTAGGGCTAGTGGCAGTGTGGTGCATACAGGATGAGGAGGCTGCCCGGCCTACAATGGGGATGGTGGTGAAGATGTTGGAAGGAATTGTGGAAGTGGCAGTTCCCCCACCACCAAAGTTGCTCCAGGCACTGGTCTCTGGCGAGTCTTTTCATGGGGTTTTGGCTGAATCCGGTGGGACATCCACCGGGGATGCCAATTCACATTCCTCTCATAGATGGTGA 2415 0.528 MSLIFCFLVVFPLILAVEGQAGEVLITGNKTILSENGTFKMGFFSANGGPNWYLGIWYASLPTPTYVWVANRETPVKSVESATVELGGDGRLKIMEVGGSVVWQTTNVEKSTAVKLLESGNLVLLSRKEKVVWQSFDFPADTWLPGMNMTAHRSITCWKSSVDPSPGSYSLRLKPPDYGEFELVFNGTMMYWSTGNWTGDRFAGVPEMTIPYIYKFRFLHPFTPAAAFWYTATALENSGGGGRPPLNRFHVDSSGLLRQYTWFPQTDTWNMFWSQPENRCRVYGLCGNLGLCNTVTLKPCECLAGFQPSDELSWSSGDFSGGCLREDNNVCSETDGGFEGIGSVSFNGAALVPIPGNSKSCEASCLMNCSCIGLYRNARSNLCYNVYGPVLNLKNLSSDSTEEGELHVRVHRRGNGKKNKWKWPVLIACVAGFSIILGLSMAVLLVFRKRRQRKKKVEEEDVFSVTNLRVFSYKELNAATQGFSEKLGHGGFGTVFKGELSDSSQVAVKRLERPGGGEKEFRAEVCTIGNIQHVNLVRLRGFCSENSHRLLVYDCMQNGPLSVYLRRDGENLSWDVRFRVAIGTARGIAYLHEECRDCIIHCDIKPENILLDSDFIPKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITAKADVYSYGMTLLELIGGRRNVETPPSAGGGGAAATGDEWFFPPWAARQIIEGNVAAVVDERLRDSYNTAEAERVGLVAVWCIQDEEAARPTMGMVVKMLEGIVEVAVPPPPKLLQALVSGESFHGVLAESGGTSTGDANSHSSHRW* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1034 804 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Vvi15g1034 804 Gene3D Transferase(Phosphotransferase) domain 1 556 765 - -
Vvi15g1034 804 Gene3D Phosphorylase Kinase; domain 1 444 554 - -
Vvi15g1034 804 FunFam Receptor-like serine/threonine-protein kinase SD1-8 19 136 - -
Vvi15g1034 804 CDD B_lectin 24 139 IPR001480 -
Vvi15g1034 804 PANTHER OS07G0415500 PROTEIN 6 770 - -
Vvi15g1034 804 ProSiteProfiles Protein kinase domain profile. 481 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g1034 804 FunFam Receptor-like protein kinase 4 444 555 - -
Vvi15g1034 804 FunFam S-receptor-like kinase 5 556 766 - -
Vvi15g1034 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 197 IPR036426 -
Vvi15g1034 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Vvi15g1034 804 Pfam D-mannose binding lectin 65 153 IPR001480 -
Vvi15g1034 804 ProSiteProfiles Bulb-type lectin domain profile. 17 137 IPR001480 -
Vvi15g1034 804 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g1034 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Vvi15g1034 804 SMART blect_4 23 139 IPR001480 -
Vvi15g1034 804 Gene3D - 20 136 IPR036426 -
Vvi15g1034 804 CDD STKc_IRAK 487 760 - -
Vvi15g1034 804 Pfam Protein kinase domain 484 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g1034 804 SUPERFAMILY Protein kinase-like (PK-like) 463 758 IPR011009 -
Vvi15g1034 804 Pfam S-locus glycoprotein domain 192 309 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g1034 Vvi-Chr15 18644615 18647029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1034 430 767 Receptor kinase-like Gene Family AT5G20050 42.896 9.43e-82 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi15g1034 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g1034 - - vvi:100248272 1635.54