Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g1031 ATGGCGTCTCCCGCGCTGTTGCAGTCTAATGCGTCCTCGTTTCACGGTCAGTTCCCACTTGCCTCATCTCCCTTCTCTGTGCGTCTCCCGTACGGAAACCCTAGGAATGGATGCGGGTTTTCAGTGAAGGCTTTGTCTGAGATTGTATTGGTGGAGAAATCTGAAGCGGTGAAGACTAATCGACTCAAAACCACCTACCTTGAGAAGATAGTTCCATTGCTCAAGGAGGAGTTCTCCTATCAGAACATGCATGAGGTTCCAAAGATCGAAAAGATTGTTCTGAACTGTGGTATTGGAGATGCTTCACAGAATGCAAAGGGTTTAGAAGCAGCCATGAACGAGCTGGCTCTTATTGCAGGGCAGAGACCTGTAAAGACACGTGCAAGGGCATCCATTGCCACCTTCAAGCTCAGGGAAGGTCAGCCTGTTGGGATTGCTGTCACACTTAGAGGAAATATGATGTACTCATTTCTGGATCGGCTCATCAACTTGGGGCTTCCCAGAACTAGGGATTTCCAGGGTGTGAATCCAAACAGCTTTGATGGGCATGGGAACTACAGCATTGGCATGAAGGATCAGAGTGTGTTCCCAGAGATCCGGTTTGATATTCTTGGTAGAGCAAGGGGAATGGATGTCTGTATAACGACCACTGCTAAAACAGATAAAGAAGGGCAGCAGCTACTGGCTCTCATGGGGATGCCTTTCAGAGAAGGCGGCGGCTCCACTGTCGTGCAGAGGAAGAAGAAGCTCAAGGCTCATCATTTTGATTCCAAATCAAAGGGAAGGGCCAGGAGATAA 798 0.4875 MASPALLQSNASSFHGQFPLASSPFSVRLPYGNPRNGCGFSVKALSEIVLVEKSEAVKTNRLKTTYLEKIVPLLKEEFSYQNMHEVPKIEKIVLNCGIGDASQNAKGLEAAMNELALIAGQRPVKTRARASIATFKLREGQPVGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGMKDQSVFPEIRFDILGRARGMDVCITTTAKTDKEGQQLLALMGMPFREGGGSTVVQRKKKLKAHHFDSKSKGRARR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g1031 265 SUPERFAMILY RL5-like 61 236 IPR022803 -
Vvi15g1031 265 Pfam ribosomal L5P family C-terminus 142 235 IPR031309 -
Vvi15g1031 265 Gene3D - 53 237 IPR022803 -
Vvi15g1031 265 ProSitePatterns Ribosomal protein L5 signature. 115 131 IPR020929 GO:0003735|GO:0005840|GO:0006412
Vvi15g1031 265 Hamap 50S ribosomal protein L5 [rplE]. 59 237 IPR020930 GO:0003735|GO:0005840|GO:0006412
Vvi15g1031 265 FunFam 50S ribosomal protein L5 58 237 - -
Vvi15g1031 265 Pfam Ribosomal protein L5 82 138 IPR031310 -
Vvi15g1031 265 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 63 241 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g1031 88 215 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 25.781 3.18e-06 44.7