Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0997 ATGGGGAATGAAGAAGAGGGGAAGTCCCCTAAGCCTGAAAAACCAACTTCACCTCCACCACCGGATCAAGCCAATATTCATGTGTATCCTGATTGGGCAGCCATGCAGGCATATTATGGCCCCAGGGTCACTCTACCTCCATATTACAATTCAGCTATGGCATCTGGTCATGCTCCTCATCCTTACATTTGGGGCCCTCCACAGCCAATGATGCCGCCTTATGGGCCACCATATGCGGCAATCTACTCGCCTGGAGGTGTTTATCCACATCCTGCAGTTCCTCTTGGGTCACATTCACATGGGCATGGGGTTCAATCATCACCTGTTGTAAGCGAAGCATTGGCTGCACCTCCTTTGAGCATAGAAACACCTGCAAAGTCATCAGGAAATACAGACCGTGGTTTAATGAAGAAGTTGAAAGGGTTTGATGGGCTTGCAATGTCCATAGGGAATGGCAATGGTGAGAGCACCGAGGGTGGGTCTGATCATGGATTATCTCAGAGTGGAGAAACTGAAGGTTCCAGTGATGGAAGTGATGGGAATACAGCAGGGGCAGATCAAACTAGAAGGAAAAGAAGCCGGGAGGGAACACCACCTATAGGTGGAGATGGGAAAACTGAGACACAGGCCACTTCAGCTCCTTCTGCAGAGGTAAATGCAGGTTCTGATAAGGTGTTGGGTGTTGCTGTCCCTCCCACTAGTGTCACAGGAAAATTGGCAGGAGCTGTACTTTCTCCTAGAATGAGCACAGCATTGGAGCTCAGAAATCCTCCTAGTGTGAATGCAAAAACTAGTCCGAGTAGCATCCCTCAACCTGGTGCTATGGTGCCTTCTGACACATGGATACTGAATGAAAGGGAGATAAAACGTGAGAGGAGAAAACAGTCTAATCGAGAATCTGCAAGAAGGTCAAGGTTGAGGAAGCAGGCTGAGACCGAAGAACTTGCACTGAAAGTTGAAAGCTTGAATACTGAGAATTCGGTACTTAAATCTGAAATTAATCGCTTAAGAGAGAATTCAGAGAAACTGAAGCTTGAAAATGCCACATTAATGGAGAAACTAAAAAGCGCACAGTTAGAACAAGCAGAAGATACACATTTGAATAAGGTCGACGACAAGAGAGTCCTGCCTGTCAGCACAGAGAACCTACTTTCCAGAGTCAATAATTCAGGTTCTGTCGACAGGAGCACTGAGGAAGAAGGCGACATGTACGAGAAAAACACAAACACTGGCGCAAAGCTGCACCAACTTCTGGATACGAGTCCCAGGGCAGATGCAGTGGCTGCTGGATGA 1293 0.4741 MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTLPPYYNSAMASGHAPHPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHPAVPLGSHSHGHGVQSSPVVSEALAAPPLSIETPAKSSGNTDRGLMKKLKGFDGLAMSIGNGNGESTEGGSDHGLSQSGETEGSSDGSDGNTAGADQTRRKRSREGTPPIGGDGKTETQATSAPSAEVNAGSDKVLGVAVPPTSVTGKLAGAVLSPRMSTALELRNPPSVNAKTSPSSIPQPGAMVPSDTWILNEREIKRERRKQSNRESARRSRLRKQAETEELALKVESLNTENSVLKSEINRLRENSEKLKLENATLMEKLKSAQLEQAEDTHLNKVDDKRVLPVSTENLLSRVNNSGSVDRSTEEEGDMYEKNTNTGAKLHQLLDTSPRADAVAAG* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0997 430 Pfam Disordered region downstream of MFMR 132 266 - -
Vvi15g0997 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 292 307 IPR004827 GO:0003700|GO:0006355
Vvi15g0997 430 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Vvi15g0997 430 Pfam bZIP transcription factor 285 347 IPR004827 GO:0003700|GO:0006355
Vvi15g0997 430 SUPERFAMILY Leucine zipper domain 288 344 IPR046347 GO:0003700|GO:0006355
Vvi15g0997 430 MobiDBLite consensus disorder prediction 150 184 - -
Vvi15g0997 430 SMART brlzneu 285 349 IPR004827 GO:0003700|GO:0006355
Vvi15g0997 430 MobiDBLite consensus disorder prediction 1 26 - -
Vvi15g0997 430 MobiDBLite consensus disorder prediction 204 218 - -
Vvi15g0997 430 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 405 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vvi15g0997 430 MobiDBLite consensus disorder prediction 254 311 - -
Vvi15g0997 430 MobiDBLite consensus disorder prediction 147 229 - -
Vvi15g0997 430 MobiDBLite consensus disorder prediction 283 311 - -
Vvi15g0997 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 287 350 IPR004827 GO:0003700|GO:0006355
Vvi15g0997 430 MobiDBLite consensus disorder prediction 254 274 - -
Vvi15g0997 430 Gene3D - 288 342 - -
Vvi15g0997 430 Coils Coil 319 360 - -
Vvi15g0997 430 MobiDBLite consensus disorder prediction 385 430 - -
Vvi15g0997 430 CDD bZIP_plant_GBF1 290 338 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0997 Vvi-Chr15 18416886 18420808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0997 1 430 bZIP Transcription Factor Family AT2G46270 52.414 1.83e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi15g0997 MFMR_assoc 5.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0997 K09060 - vvi:100248302 790.03