Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0985 ATGGAGCAATTCAGGCAAATGGGAGAGGTTTTGGGGAGTTTGAAGGCATTTATGGTGTTCCGGGAAGATATTCAGATCAACCAGAGGCAATGCTGTTTGTTGCTGGATGTTCTCGACTTGGCTTATCACACAGTAGCAGAAGAGATGAAGCAGAATCTTCGATTAGACGAGAAGCATACAAAATGGAAAATTCTTGAACAGCCCCTGAGGGAGTTGCACGGGGTATTCAAAGAAGGAGAACACTACGTAAGACAGTGTTTGGACACGAAAGAATGGTGGGCTAAAGCCATTATATTCTATCAGAACACGGACAGCGTTGAGTTTCACATCCATAACTTGCTCTGCTGCTTTCCAGTGGTCATTGAAGCCATTGAAATTGCAGGAGAAAACTCGGGTTGGGACCAGGATGAGATACAGAAGAAGAGGGTATTGTTCTCCACGAAGTATCAGAAAGAATGGCAAGACCCGAAACTCTTTCAATGGAGATTCGGGAAGCAGTATTTGATCTCTAAGGACTTCTGCAGCCGGGTAGATGAAGTTTGGAGAGAAGATAGGTGGATTCTCCTCAACAAAATCCAAGGGAAGAGACCTTCAGGTTCAGTGAGCTTAACAAAGTATGAACAACGACTCAGGGATCTCCTTTTCAAGAACTTGGATGTGTCACAGCCTTTGAATGGGAAGCTCCTACCGAGTTCAATCCTACTGGGCTCTAAGGACTACCAGGTGAGGCGGCGGCTAGGGAGCGGGAGCCAGTACAAGGAGATCATGTGGTTGGGTGAAAGCTTTGCTTTAAGACACTTCTACGGGGAGATTGAGCCTCTTGTCCCTGAAATATCCCAACTCTTGTCCCTCTCCCACCCGAATATAATGCGCTTACTTTGTGGGTTCATTGATGAGGAAAAGAGAGAGTGTTTTTTGGTTATGGAACTAATGTATAAAGATCTCTGCAGCCATCTCAAGGAGATATGTGGACCAAGGAGGAGACTTCCATTTTCTCTTCCTGTTGCAGTTGATCTTATGCTTCAAGTTGCAAGAGGAATGGAGTATCTCCACTCAAAGAAAATCTACCATGGGGATCTAAATCCTTCTAACATTCTTGTTAAAGCAAGGAGCATCTCCACAGAAGGGTATTTGCATGCCAAAGTTTCAGGGTTCGGTTTATCTTCCACTAAAAACTTAAACCAGAAAACTTCTCCAAATCAAGCTGTGAATCTCCCGTTTATATGGCATGCTCCAGAAGTTCTAGCAGATCAAGAACAGCTGGGTAAAACTGGGAATTTCAAGTACACAGAGAAGGCAGATGTGTACAGTTTTGGAATGGTTTGTTTTGAACTCTTGACTGGGAAAGTCCCTTTTGAGGATAGCCATCTTCAAGGAGATAAGATGAGTCGAAATATTAGGGCAGGGGAGAGGCCCCTTTTCCCATCCAATTCACCAAAATACATAACAAACTTGACAAAGAAATGTTGGCATACTGACCCGAATCAGCGGCCAAGCTTCTCATCCATCTGTAGGATTCTTAGGTATACGAAATGGTTCCTAGCTATGAACCCTGATCACAGCCAGCCAGATGCCCCAGTGCCACTTGTTGATTTCTGTGACATTGAGGCAGGGCTTCTGAAGACGATACCCTCATGGAGAAGTTCTGATCCACTGCCAATATCAGACATCCCATTTCAGATTTTTGTCTATAGAGCTGTGGAGAAGGAGAAATTACATGCAATTCCTAAACAAAAGAGTTCAGAATCAGGAAGTGATGGATATTCAACCTGTGGAGATGAGCCTCTGACCATAATTGATGATCCACCCCCACCCATGACTGAAAAGAAGCCTTCAGTTTCTTCTGAAACTACGAGCAAAAAAATTTCAGTCTTGAAGAAATCTTCCAGTGTGAAAGTCATTAAGCAAACAGGAACACCTAAAGGACAATTGCTCAGACCTCCACTGATGAGCCCATGTGGGCGTACTATCAGACTGAGCTCCGAGGGGCATCTAGTGGCAATGATCCCAAAACCACGAAGAACACGTGGGCATGCCTCAGATTCTGAGCTCTCCTAG 2058 0.4451 MEQFRQMGEVLGSLKAFMVFREDIQINQRQCCLLLDVLDLAYHTVAEEMKQNLRLDEKHTKWKILEQPLRELHGVFKEGEHYVRQCLDTKEWWAKAIIFYQNTDSVEFHIHNLLCCFPVVIEAIEIAGENSGWDQDEIQKKRVLFSTKYQKEWQDPKLFQWRFGKQYLISKDFCSRVDEVWREDRWILLNKIQGKRPSGSVSLTKYEQRLRDLLFKNLDVSQPLNGKLLPSSILLGSKDYQVRRRLGSGSQYKEIMWLGESFALRHFYGEIEPLVPEISQLLSLSHPNIMRLLCGFIDEEKRECFLVMELMYKDLCSHLKEICGPRRRLPFSLPVAVDLMLQVARGMEYLHSKKIYHGDLNPSNILVKARSISTEGYLHAKVSGFGLSSTKNLNQKTSPNQAVNLPFIWHAPEVLADQEQLGKTGNFKYTEKADVYSFGMVCFELLTGKVPFEDSHLQGDKMSRNIRAGERPLFPSNSPKYITNLTKKCWHTDPNQRPSFSSICRILRYTKWFLAMNPDHSQPDAPVPLVDFCDIEAGLLKTIPSWRSSDPLPISDIPFQIFVYRAVEKEKLHAIPKQKSSESGSDGYSTCGDEPLTIIDDPPPPMTEKKPSVSSETTSKKISVLKKSSSVKVIKQTGTPKGQLLRPPLMSPCGRTIRLSSEGHLVAMIPKPRRTRGHASDSELS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0985 685 SUPERFAMILY Protein kinase-like (PK-like) 234 530 IPR011009 -
Vvi15g0985 685 PANTHER SERINE-THREONINE PROTEIN KINASE 273 508 - -
Vvi15g0985 685 MobiDBLite consensus disorder prediction 575 621 - -
Vvi15g0985 685 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Vvi15g0985 685 Gene3D Transferase(Phosphotransferase) domain 1 233 521 - -
Vvi15g0985 685 ProSiteProfiles Protein kinase domain profile. 240 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0985 685 Pfam Protein tyrosine and serine/threonine kinase 272 506 IPR001245 GO:0004672|GO:0006468
Vvi15g0985 685 FunFam Kinase family protein 237 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0985 Vvi-Chr15 18339693 18341948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0985 277 507 MAP Kinase Kinase Kinase AT5G58950 30.085 1.43e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vvi15g0985 PK_Tyr_Ser-Thr 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0985 - - vvi:100267034 1384.39