Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0931 ATGACGACCTTCAAGCTCTTTGGTACTGAGATATCGGTGCCGAAGGAAAGAGAAAACAAGATACCACCTCTCTCCCAACTGCCTTGTGCAATCCTGCATACTAATAAAGGCATGAAGGAGCGTGGCCGGGTTTTGGTGATGAGAAAGACACTGACAACATCCGATGTGTCCGTGCATCAGAGTCGGCTTTTCATCACCAATAGTAAGGTGCTGTGGAGCCAGTTATTGGAGGAGGAGCAGAAGAAGGTGAAGGCAAAAGAGCACGTTGAAGTTGAGGTCGTGGATCCCAAGGGGGGGAGGACTAGGATGAAGTTGAGGCGGTGGCAGAGTTTGAATATACTTGTGCTGAATTCCGGATGGGTAAAGCTTGTGAAGGTTAACAAGCTGGAGGCGAAGATTTTGCTTGTGATAATGATCACTCTTGCCCCTTCAGCCATGGAAAATAATATCTCTCTCTCTTTCTCTCTTCTTTTGGTCCTCTTGATTGCGCTCCTCCTCCTTTCGGGTCGCTTGGCTTCTTGTTCTTTAGGAGGCTCCATCTTCATTTCTTCTTCTATTTTATTCGGCGCCATCTCCACTCCAAACAGTCCGATGATCTTCACTTCTTCTTCGTTGAGGCCTGACTCAATCGGCAAGGGATTGGTGTGGGATGTGGGAACAGAAAAAAAAAATTATATATATATATATATATATATATATATATCTTTTGTTAAAGTTGCCAGCATCTTTCAGAGGTTTTGTCCTTACTAA 750 0.4453 MTTFKLFGTEISVPKERENKIPPLSQLPCAILHTNKGMKERGRVLVMRKTLTTSDVSVHQSRLFITNSKVLWSQLLEEEQKKVKAKEHVEVEVVDPKGGRTRMKLRRWQSLNILVLNSGWVKLVKVNKLEAKILLVIMITLAPSAMENNISLSFSLLLVLLIALLLLSGRLASCSLGGSIFISSSILFGAISTPNSPMIFTSSSLRPDSIGKGLVWDVGTEKKNYIYIYIYIYISFVKVASIFQRFCPY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0931 249 Pfam B3 domain-containing protein At2g31720-like 40 125 IPR005508 GO:0003677
Vvi15g0931 249 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 16 132 IPR005508 GO:0003677
Vvi15g0931 249 Gene3D - 35 144 IPR015300 -
Vvi15g0931 249 SUPERFAMILY DNA-binding pseudobarrel domain 44 135 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0931 Vvi-Chr15 17809174 17810319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0931 47 124 B3 DNA Binding Superfamily AT1G20600 37.500 3.68e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0931 - K23195 vvi:104881957 226.868