Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0816 ATGACCCTCCGATGCATGCAGGCTCTTGTTCGAGTGCAGGCCCGAGTGCTCGATCAGCGCCTGAGACTTTCCCACGAGGGAAGTCGAAAATCCACATTCAGCGATACAAACAGTTTGTGGGAATCCCGGTATCTTCAGGACATTGCAGAGAGAAAATCAATTTCGAGAGAAGGAAGTAGCATCGCTGATGATTGGGATGAACGCCCACATACCATTGAGGAAGTGAAGGCCATGTTGCAGACCAGAAAGGAAGCTGCGTTGAAGCGTGAGAAGAACTTATCTCAGGCCTTATCCCAACAGATATGGAGAACTGGTAGGAGCCCGTCAATGGGGAATGAGGATGAGCTTGAAGAGAAACCGAAATGGCTGGATCGGTGGATGGCCACGAAGCCCTGGGAGAGCAGGGGACGAGCTTCAACTGACCAGAGAGACCCCATTAAGACTGTGGAAATTGACACCTCCCAACCTTATTCCTACTTAGCTCCTAATTTCCGAAGATCAAATCAAAACCAGTACCAACCAAACCAATTCCAAAGACCCAATTCGCATTCTGTTGCTTCTCCTCTTCATAGAGCCCACCAAAACGTATCCCACCACCAATCTCCTATCACACCCTCTCCCTCTAAAACAAGGCCTCTGCAAGTCCGGTCGGCTAGTCCTCGCTGTGGAAGAGAAGACAGAAGCCTTCACACCTCTCAAACACCCAGTTTAAGGTCTAATTACTACTACAATGGAGGATTGCATCAACAAGGAAGGGGCGCTACTACTAGTGGTGGTGGCAGTGGTGGTCCTGCATTGCCAAATTACATGGCAGCTACCGAGTCCACTAAGGCCCGGGTTCGGTCACAAAGTGCACCAAGGCAGAGACCGTCAACACCGGAGAGGGAACGGGGTGGCCCTGGCTCTGTCTCCGGCTCTGCGAGAAAACGCCTTTCCTTCCCTGCCCCGGATCCTTACAGCGGTGGAATTGGCTATGGAGGCTATGGACATAACTTGAGGAGTCCAAGTTTCAAGAGTGTGGGTGGAGGATATCTGGGGTTGGAACAACAGTCTAACTATTCTTCTTGCTGCACAGACAGTCTTGGTGGGGAGATCTCCCCTTCTTCAACCAGTGACCTTAGAAGGTGGATGAGGTGA 1137 0.511 MTLRCMQALVRVQARVLDQRLRLSHEGSRKSTFSDTNSLWESRYLQDIAERKSISREGSSIADDWDERPHTIEEVKAMLQTRKEAALKREKNLSQALSQQIWRTGRSPSMGNEDELEEKPKWLDRWMATKPWESRGRASTDQRDPIKTVEIDTSQPYSYLAPNFRRSNQNQYQPNQFQRPNSHSVASPLHRAHQNVSHHQSPITPSPSKTRPLQVRSASPRCGREDRSLHTSQTPSLRSNYYYNGGLHQQGRGATTSGGGSGGPALPNYMAATESTKARVRSQSAPRQRPSTPERERGGPGSVSGSARKRLSFPAPDPYSGGIGYGGYGHNLRSPSFKSVGGGYLGLEQQSNYSSCCTDSLGGEISPSSTSDLRRWMR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0816 378 PANTHER IQ-DOMAIN 5-RELATED 1 315 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 229 257 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 133 157 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 170 315 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 170 215 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 133 148 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 355 378 - -
Vvi15g0816 378 MobiDBLite consensus disorder prediction 275 289 - -
Vvi15g0816 378 Pfam Protein of unknown function (DUF4005) 219 326 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0816 Vvi-Chr15 16815366 16816695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0816 1 378 IQD Protein Family AT4G00820 60.465 7.54e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0816 - - vvi:100264217 751.895