Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0797 ATGGAGCCTTCAGCAGAAGAGAAACAGAGCAGCAGGCTATGCCATGAGGATGGTGATGTAGAGCCCTGCTCCTACGCCATGCAATTGGTGACTTCGTCTGTGTTGCCCATGGTTATGCAGACCTCCATTGAGCTAGGCCTTTTTGATATCATTGCCAACTTGGGTCAGGCCTCTGCCTCAGAAATAGCTTCCCGGCTGCCTACAAAGAACCAAGAGGCACCCATCATCCTGGATCGTATGCTCTACCTTCTTACCACTCACTCTGTTCTCAGTTGCTCTGCCATTGATGGTGATGAGAGGGTGTACGCACTCACACCTGTCTCCAAATACTTTGCCAGTAATCAAGGAGTTTCCTTCGGCCCACTACTGGCTTTGATCCAGGACAAGGTCTTCATGGATAGCTGGTCCCAACTGAAAAATGCGATTATTGAAGGAGGAATACCATTTAACAGGGTCCATGGATCTCATGCATTTGAGTACCCTGGCAAGGACCCCAGATTCAATCAGGTTTTCAACACAGCAATGTTCAACCACACAACGGTAATTGTTAATAAGATCCTTGAGTCCTACAAGGGTTTTGAGCACCTTACGCGGGTGGTCGATGTTGGTGGCGGTCTGGGAACCACCCTTAGCATAATCACATCCAAATACCCCCATATTGAGGCTATTAATTTTGACTTGCCTCATGTTATAGAACATGCTGTGGCGTATCCTGGTGTGAAACACATTGGAGGGGATATGTTTGTAAGTGTTCCCAAAGGAGATGCCATTTTTATGAAGGTGAGTTTTGAGTCTTTCCAGCATCCTAACCAGCGTATTGGCTGCTGTATTGACAGTTAA 840 0.4702 MEPSAEEKQSSRLCHEDGDVEPCSYAMQLVTSSVLPMVMQTSIELGLFDIIANLGQASASEIASRLPTKNQEAPIILDRMLYLLTTHSVLSCSAIDGDERVYALTPVSKYFASNQGVSFGPLLALIQDKVFMDSWSQLKNAIIEGGIPFNRVHGSHAFEYPGKDPRFNQVFNTAMFNHTTVIVNKILESYKGFEHLTRVVDVGGGLGTTLSIITSKYPHIEAINFDLPHVIEHAVAYPGVKHIGGDMFVSVPKGDAIFMKVSFESFQHPNQRIGCCIDS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0797 279 CDD AdoMet_MTases 198 268 - -
Vvi15g0797 279 Gene3D - 3 111 IPR036388 -
Vvi15g0797 279 PANTHER O-METHYLTRANSFERASE 26 261 IPR016461 GO:0008168
Vvi15g0797 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 270 IPR029063 -
Vvi15g0797 279 Pfam Dimerisation domain 37 85 IPR012967 GO:0046983
Vvi15g0797 279 Pfam O-methyltransferase domain 135 261 IPR001077 GO:0008171
Vvi15g0797 279 Gene3D Vaccinia Virus protein VP39 112 272 IPR029063 -
Vvi15g0797 279 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
Vvi15g0797 279 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 279 IPR016461 GO:0008168
Vvi15g0797 279 FunFam Caffeic acid 3-O-methyltransferase 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0797 Vvi-Chr15 16663028 16664629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0797 19 260 Monolignol Biosynthesis Gene Families AT5G54160 59.677 7.20e-105 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0797 K13066 - vvi:100265990 512.686