Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi15g0788 | ATGGAAGGTGAGATGATGAATAAGGGGGTGTCGGGGAGCGAAGCTTACTGGCTTGATGCCTGTGAGGACATTCCCTGCGACCTTGATTTCCCTGAGTTTGAAAGTAATATTGTTTCTGAATCGGCGGATGCTCCTTCCAATCCGGACGGCGTGGGTGATTTCTTTGGAGGAATTGATCGCATTCTTGACAGTATAAAAAATGGCACCGGCCTCACTCCTGTTGTTGATGAAGGCACGACTGGAATTCCTGATTGCGCCGTTTCCCAGACCTGGTTTCAGACTGAGAATGTCGCAGTTGGGGCTTCCAATTTGCAACTTCATCACTCATTTGGTGTATCTGATGTGTCCCCAAATGACACTAATGGCACTAAAAGGCGGTCTGATGATGATGGGTGCCAGTTTCATGAAGCTGATAATGGGAAAATGTCATTGGATGGTAAAGCAGAATCGAAATTGGTTCATTCTCCCAAGGGAAATGGAGTAAAAAAGCATGAAAATCGGCCTAATGATGCCTCAAGGGATCGGGATTTTGATGACCAAGAAAGGTATAGCAAAAGGGCTCGACTTGGTGACTCAAAGAATGATAGGCATTATTCAACCAGAGGGCAATATCAACCCAGGGAAAGGTCCTCTTGCAGGAAGAGAAGTCGCAATTGGGAGGAGTTTGATCGGAGAGATGGGGATCAAATTAGGAGAAAAGAACATTACGGTAGCAGGAGGGAAAGTAGAGACAGGGAGTGGAGGGACAGAGAAGCCAAGGGTTATTGGGAGAGGGATCGGTTAGGGTCTAAAGAGATGATTTTTCACCTGGGTTCTTGGGAAGCTGAAAGGAATAGAGAAGGCAAGATGGGAGCGGAGAAAAACCAGGAATGCAATGGAAGTGTGACAGAGAGGAGACTCGAGGAGCCTAAGGAGAAACTTCCTGAAGAGCAAGCCCGACAGTATCAACTGGATGTTCTTGAACAAGCAAAGAAGAGAAATACAATAGCTTTTCTTGAGACAGGGGCCGGGAAAACGCTTATTGCTGTCCTTCTCATCAGAAGTGTTTTCAATGATTTGCAAGGACAAAACAAGAAATTGCTTGCTGTCTTTTTGGTACCAAAAGTTCCACTTGTTTATCAGCAAGCAGAAGTTATTCGAGAGCGAACTGGTTACCAGGTGGGTCATTACTGTGGTGAAATGGGTCAAGATTTCTGGGATGCTCGAAGGTGGCAGCGCGAGTTTGAAACAAAACATGTTTTAGTGATGACAGCTCAAATTCTGCTGAACATTCTGAGGCATAGCATAATAAAAATGGAAGCGATTAATCTTCTCATTCTGGATGAGTGTCATCATGCAGTGAAGAAACATCCTTATTCCTTAGTGATGTCGGAGTTCTATCATACAACTCCGAAGGAGAAGAGGCCATCTGTTTTTGGGATGACTGCTTCTCCTGTTAACTTGAAAGGTGTTTCCAGCCAAGTGGATTGTGCAATAAAGATTCGTAATCTTGAAAGCAAACTAGATTCCATAGTTTGTACAATAAAAGACCGCAAAGAGTTGGAAAAACATGTGCCAATGCCCTCAGAAATTGTGGTTGAGTATGACAAAGCTGCCACCTTGTGGTCCCTTCATGAACAAATAAAACAAATGGAACTAGCAGTTGAGGAAGCTGCTCAATCTAGTTCTAGGAGAAGTAAATGGCAATTTATGGGAGCCAGAGATGCTGGGGCAAAGGAAGAGCTGCGCCAAGTTTATGGTGTTTCTGAAAGAACCGAGAGTGATGGGGCTGCTAATTTGATTCAAAAGTTGAGGGCCATTAACTATGCACTTGGTGAACTGGGACAGTGGTGTGCGTTCAAGGTTGCTCAATCTTTCTTGACAGCTTTACAAAATGATGAGAGGGCAAACTACCAGCTTGATGTCAAGTTTCAAGAATCCTACTTGAATAAAGTTGTATCTCTCTTACAATGCCAATTATCAGAGGGAGCTGTTTCTGACAAGGATAAAAAAGTAGTGGACACTGAGACTAGTGTTAGTGTGGATGGGAGTGCTATTGAAGAGATTGAGGAGGGAGAGCTGCCTAACAGTCATGTTGTCTCTGGTGGAGAGCATGTGGATGTAATAATTGGGGCTGCCGTGGCGGATGGAAAAGTGACTCCAAAAGTGCAGTCACTGGTTAAAATACTTCTGAAGTATCAACAGACAGAGGATTTCCGTGCAATCATCTTTGTTGAGCGAGTGGTGGCTGCATTGGTTCTTCCTAAGGTTTTTGCAGAGCTTCCTTCTCTAAGTTTTATTAAGTGTGCTAGCCTGATTGGGCACAATAACAGTCAGGAAATGAGGACTTGCCAGATGCAGGACACGATTGCCAAATTCCGAGATGGACGTGTGACATTATTAGTTGCCACTAGTGTTGCCGAGGAAGGACTTGATATTCGGCAATGCAATGTTGTTATTCGATTTGACCTTGCAAAAACTGTCTTAGCATACATCCAATCTAGGGGCCGTGCAAGAAAGCCTGGGTCTGATTACATCTTGATGGTTGAGAGGGGAAATTTGTCACATGGAGCATTTTTGAGGAATGCTAGGAATAGTGAGGAGACCTTGCGAAAGGAGGCAATTGAGAGAACTGACCTTAGTCATCTTAAGGGTACATCAAGGTTAATTTCAGTGGATACAACACCAGGTACTGTCTACCAGGTGGAGTCCACTGGTGCTATTGTAAGTTTAAATTCTGCTGTTGGACTTATCCATTTCTATTGCTCTCAGCTACCCAGTGACAGGTATTCAATACTTCGTCCTGAGTTTATTATGGAGCGGCATGAGAAACCAGGAGGTCCTACTGAATATTCATGCAAGCTTCAACTGCCCTGTAATGCACCATTTGAAAAACTTGAGGGTCCAGTATGCAGTTCAATGCGCCTTGCACAACAGGCTGTTTGTTTGGCTGCTTGTAAGAAGCTTCATGAGATGGGGGCATTTACTGACATGCTCTTGCCAGACAAGGGAAGTGGGGAAGAAGGAGAAAAGGTTGACCAGAATGATGAAGGAGATCCACTTCCTGGGACTGCTAGGCATAGGGAGTTCTATCCTGAAGGTGTGGCTAATGTTCTCCAGGGAGAATGGATTTTATTGGGGAAGGATGGTTGCAACAGCTCCAGATTGGTTCATTTGTATATGTATGCAGTTAAATGTGTAAATTTCGGCTCCTCAAAAGATCCATTCTTAACTCAAGTTTCAGATTTTGTAGTACTTTTCGGCAATGAGCTGGATGCAGAGGTGTTATCGATCTCGATGGATCTCTTTATTGCTCGAACCATGGTAACAAAGGCATCTCTTGTCTTCTGGGGACCAATAGATATTACAGAGAGTCAGTTGGCATCCCTTAAGAGTTTTCATGTAAGATTGATGAGCATTGTACTGGATGTGGATGTTGAGCCTTCCACCACTCCATGGGATCCAGCAAAAGCATATTTGTTTGTCCCTGTGGTTGGCGATAAGTCCGAAGATCCTATAAGACAAATTGATTGGGATATTGTTGAAAGAATAATCAGGACAGATGGATGGAGCAATCCCCTTCAAAGAGCTCGGCCAGATGTTTACCTTGGCACAAATGAGCGGACACTAGGTGGAGACCGAAGGGAGTATGGATTTGGGAAATTGCGACATGGCATGGCTTTTGGACAGAAGTCTCATCCCACCTATGGTATCAGAGGAGCTGTAGCTCAGTATGATGTCGTGAGAGCTTCTGGATTGGTTCCAAATCGGGAAACCATTGAAATGATGAAGGGTGAGGATTTGACCAAAGGCAAGCTGATGATGGCTGGTACTCAGACCAGTGCAGAAGATCTGGTGGGGCGAATTGTAACGGCTGCACACTCAGGAAAGAGGTTTTATGTGGATTCTGTACGGTATGATATGACAGCAGAGAACTCATTCCCGAGGAAAGAAGGTTATCTTGGTCCTTTGGAGTACAGCTCATATGCTGACTACTATAGGCAGAAATACGGTGTCGAATTGATTTATAAGCAACAACCTCTGATAAGAGGACGGGGTGTTTCATACTGTAAGAATCTCCTGTCCCCTCGGTTTGAACACTCAGAAGCACATGAAGGCGAATCTGATGAGACTCTTGACAAAACATACTATGTATTCCTCCCACCTGAGCTGTGTTTTGTACATCCACTTCCTGGATCACTTGTTCGAAGTGCCCAGAGATTGCCCTCAATAATGAGGAGGGTTGAAAGTATGCTGCTTGCGGTCCAGCTAAAAGATGTAATTAATTATCCTGTTCCTGCTGCAAAGATCTTGGAAGCCTTGACTGCTGCTTCATGTCAAGAGACATTCTGCTATGAAAGAGCAGAACTTCTGGGAGATGCTTACCTGAAGTGGGTTGTTAGTCGATTTCTATTTCTTAAGTACCCCCAGAAACACGAGGGACAGCTCACTAGGATGCGACAACAAATGGTGAGTAATATGGTCCTTTATCAGTCTGCATTGTGTAAAGGACTTCAATCATACATCCAAGCAGATCGCTTTGCTCCGTCTAGATGGGCTGCTCCTGGGGTGCTTCCTGTCTTTGATGAAGATACCAAAGAGACAGAATCATCCTTATTTGACCATGAAAGACCATTTTCTGAGACTGCACCAGGCAATGATCGTCATGGTGATGGATATGATGATGATGAAATGGAAGATGGTGAGCTTGAGAGTGATTCAAGTTCTTATAGGGTCCTCTCTAGCAAGACACTTGCAGATGTAGTTGAAGCTCTGATTGGAGTTTATTATGTTGAAGGTGGGAAGAATGCTGCTAACCACCTCATGAAATGGATTGGGATCCAAGTAGAGTTTGATCCTGAGGATATAGTGTGCGCAACTGGGCCATGCAATGTTCCAGAGAGCATACTCAGGAGTGTTAACTTTGATACTTTAGAAGGTGCCTTAAACATTAAGTTTAACAACAGAGGCCTGTTAATAGAAGCCATTACTCATGCTTCACGGCCATCTTCTGGAGTCTCCTGTTATCAGCGGTTGGAGTTTGTTGGAGATGCAGTCTTGGATCATCTCATTACAAGGCACTTGTTCTTCACATACACAGACCTGCCCCCAGGCCGGTTGACCGACTTGCGGGCTGCTGCCGTAAACAATGAAAACTTTGCTCGTGTCGCAGTTAAACATAAGCTCCACATTCACCTTCGGCATGGGTCGAGTGCCCTTGAAAAACAGATTCGGGACTTTGTGAAGGAAGTTCAAGATGAATTATCAAAACCAGGGTTCAACTCCTTTGGTTTGGGAGATTGCAAAGCTCCAAAAGTTCTTGGTGATATTGTTGAATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGATGCAAAGCTCCAAAAGTCTGGTGATATGTGAATCTATTGCTGGTGCTATTTTCCTCGACAGTGGACGTGATACTGCTGTGGTCTGGAAGGTTTTCCAACCTTTGTTGCATCCAATGGTTACTCCAGAAACACTCCCAATGCATCCTGTGAGGGAGCTGCAAGAAAGATGCCAACAACAGGCTGAGGGCTTGGAGTACAAAGCCACTCGAAGTGGCAATTTGGCTACTGTTGAAGTATTCATTGATGGTGTCCAGATTGGGATTGCTCAGAATCCACAGAAGAAGATGGCACAGAAACTAGCTGCTAGAAATGCTCTTGTTGTTTTAAAAGAAAGGGAAACAGCTGAAGCTAAGGAGGGTGATGATGAGAATGGGAAGAAAAAGAAGAATGGTAGCCAAACATTTACAAGACAAACATTGAATGATATCTGCTTGCGAAGAAATTGGCCCATGCCAGTCTACCGGTGTGTGAATGAGGGCGGTCCTGCACATGCCAAGAGATTTACATTTGCTGTGAGGGTGAATACAAATGATAAGGGATGGACGGATGAATGCATAGGAGAGCCAATGCCCAGTGTGAAGAAGGCCAAGGACTCTGCTGCGGTTCTGCTTTTGGAACTTCTAAATAAATGGTACACCTGA | 6066 | 0.437 | MEGEMMNKGVSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGVGDFFGGIDRILDSIKNGTGLTPVVDEGTTGIPDCAVSQTWFQTENVAVGASNLQLHHSFGVSDVSPNDTNGTKRRSDDDGCQFHEADNGKMSLDGKAESKLVHSPKGNGVKKHENRPNDASRDRDFDDQERYSKRARLGDSKNDRHYSTRGQYQPRERSSCRKRSRNWEEFDRRDGDQIRRKEHYGSRRESRDREWRDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAEKNQECNGSVTERRLEEPKEKLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQIKQMELAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSDKDKKVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKILLKYQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEMRTCQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVESTGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEMMKGEDLTKGKLMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHSEAHEGESDETLDKTYYVFLPPELCFVHPLPGSLVRSAQRLPSIMRRVESMLLAVQLKDVINYPVPAAKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKETESSLFDHERPFSETAPGNDRHGDGYDDDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVEFDPEDIVCATGPCNVPESILRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIHLRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQSSKSLVICESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQIGIAQNPQKKMAQKLAARNALVVLKERETAEAKEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNKWYT* | 2022 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi15g0788 | 2021 | Pfam | Dicer dimerisation domain | 907 | 995 | - | - | |
| Vvi15g0788 | 2021 | SMART | DRBM_3 | 1944 | 2017 | IPR014720 | - | |
| Vvi15g0788 | 2021 | SMART | DRBM_3 | 1857 | 1918 | IPR014720 | - | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 1531 | 1566 | - | - | |
| Vvi15g0788 | 2021 | Pfam | Ribonuclease III domain | 1446 | 1594 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | Pfam | Ribonuclease III domain | 1670 | 1773 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease Dicer 1 | 1269 | 1387 | - | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 718 | 879 | IPR001650 | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 319 | 496 | IPR014001 | - | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 121 | 212 | - | - | |
| Vvi15g0788 | 2021 | CDD | DSRM_DCL_plant | 1949 | 2018 | - | - | |
| Vvi15g0788 | 2021 | SUPERFAMILY | dsRNA-binding domain-like | 1853 | 1934 | - | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1856 | 1919 | IPR014720 | - | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 110 | 212 | - | - | |
| Vvi15g0788 | 2021 | Pfam | Type III restriction enzyme, res subunit | 318 | 478 | IPR006935 | GO:0003677|GO:0005524|GO:0016787 | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Ribonuclease III family domain profile. | 1432 | 1594 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease dicer-like 1 | 902 | 1003 | - | - | |
| Vvi15g0788 | 2021 | Gene3D | - | 306 | 550 | IPR027417 | - | |
| Vvi15g0788 | 2021 | SUPERFAMILY | dsRNA-binding domain-like | 1947 | 2017 | - | - | |
| Vvi15g0788 | 2021 | Pfam | Helicase conserved C-terminal domain | 715 | 832 | IPR001650 | - | |
| Vvi15g0788 | 2021 | PANTHER | DICER-RELATED | 1271 | 1922 | - | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | PAZ domain profile. | 1275 | 1389 | IPR003100 | GO:0005515 | |
| Vvi15g0788 | 2021 | Coils | Coil | 1771 | 1773 | - | - | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 1531 | 1552 | - | - | |
| Vvi15g0788 | 2021 | ProSitePatterns | Ribonuclease III family signature. | 1670 | 1678 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | CDD | RIBOc | 1430 | 1614 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | SUPERFAMILY | PAZ domain | 1275 | 1389 | IPR036085 | GO:0005515 | |
| Vvi15g0788 | 2021 | Gene3D | Ribonuclease III domain | 1630 | 1775 | IPR036389 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | Gene3D | Ribonuclease III domain | 1801 | 1851 | IPR036389 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | Gene3D | Ribonuclease III domain | 1413 | 1607 | IPR036389 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Ribonuclease III family domain profile. | 1635 | 1830 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | CDD | DEXHc_dicer | 311 | 510 | - | - | |
| Vvi15g0788 | 2021 | SUPERFAMILY | RNase III domain-like | 1628 | 1848 | IPR036389 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 993 | 1019 | - | - | |
| Vvi15g0788 | 2021 | Pfam | double strand RNA binding domain from DEAD END PROTEIN 1 | 1943 | 2016 | - | - | |
| Vvi15g0788 | 2021 | SMART | ultradead3 | 308 | 511 | IPR014001 | - | |
| Vvi15g0788 | 2021 | Pfam | PAZ domain | 1274 | 1409 | IPR003100 | GO:0005515 | |
| Vvi15g0788 | 2021 | Gene3D | - | 1949 | 2018 | - | - | |
| Vvi15g0788 | 2021 | Gene3D | paz domain | 1256 | 1396 | - | - | |
| Vvi15g0788 | 2021 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 359 | 842 | IPR027417 | - | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease dicer-like protein | 307 | 547 | - | - | |
| Vvi15g0788 | 2021 | SMART | helicmild6 | 748 | 834 | IPR001650 | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1943 | 2018 | IPR014720 | - | |
| Vvi15g0788 | 2021 | MobiDBLite | consensus disorder prediction | 996 | 1019 | - | - | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease dicer-like 1 | 1630 | 1777 | - | - | |
| Vvi15g0788 | 2021 | SUPERFAMILY | RNase III domain-like | 1405 | 1612 | IPR036389 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | Gene3D | - | 705 | 871 | IPR027417 | - | |
| Vvi15g0788 | 2021 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 907 | 1002 | IPR005034 | GO:0016891 | |
| Vvi15g0788 | 2021 | CDD | SF2_C_dicer | 712 | 842 | - | - | |
| Vvi15g0788 | 2021 | SMART | PAZ_2_a_3 | 1247 | 1413 | IPR003100 | GO:0005515 | |
| Vvi15g0788 | 2021 | Gene3D | - | 1854 | 1931 | - | - | |
| Vvi15g0788 | 2021 | SMART | riboneu5 | 1650 | 1853 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | SMART | riboneu5 | 1428 | 1614 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | CDD | RIBOc | 1651 | 1853 | IPR000999 | GO:0004525|GO:0006396 | |
| Vvi15g0788 | 2021 | Coils | Coil | 1808 | 1810 | - | - | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease dicer-like 1 | 706 | 868 | - | - | |
| Vvi15g0788 | 2021 | Gene3D | Dicer dimerisation domain | 902 | 1003 | IPR038248 | - | |
| Vvi15g0788 | 2021 | FunFam | Endoribonuclease dicer-like protein | 1411 | 1606 | - | - | |
| Vvi15g0788 | 2021 | FunFam | endoribonuclease Dicer homolog 1 | 1949 | 2018 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi15g0788 | Vvi-Chr15 | 16551973 | 16565483 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi15g0788 | 731 | 874 | Eukaryotic Initiation Factors Gene Family | AT5G11200 | 29.252 | 2.06e-06 | 50.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi15g0788 | K11592 | - | vvi:100264308 | 3897.05 |