Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0767 ATGGCTTGTAGCACAGCAGTTAATCATTCTGTGTTAGGGCTTCAACGCCAAATTGTTGGGAAGAGGCTATCCCTCCTTTCATTGCCTGCAATTACAAACCTTGGTGGCATTCCCAGAAGGAGAAGAAGCTGTCATGTCTATGCCCATCTTCAACCTTCCGTTGTTTCCGATGACCCCAAGTATGGCAACAAACAGGTCATCACAATTACTCCACGCCTTTACGACTATATATTGACAAACGTTCGGGAGCCTGAGATTCTAAGGCAACTTCGGGAGGAGACTGCTAATATGCGGGGTTCTCAAATGCAGGTATCTCCGGAGCAGGCACAACTACTTGCCATGCTCGTCCAGATTCTCGGGGCGGAACGATGTATTGAAGTTGGTGTTTACACTGGATACTCATCGTTGGCTATTGCTTTAGTCCTACCAGAATCAGGTTATTTAGTTGCTTGTGAAAGAGATTCCAAATCTCTTGAGGTTGCAAAAAGGTACTACAAGCAGGCTGGTGTGTCACACAAGGTGGACGTGAAACACGGACTAGCATCAGATGCTCTAAAATCTTTGATTTTAAATGGAGAATCTGGCAGCTATGATTTTGCATTTGTTGATGCTGAGAAGAGAATGAATCAAGAATACTTTGAATTGCTACTGCAACTGGTGAGGACCAGGGGTGTCATTGTGATTGATAATGTTCTCTGGCATGGAAAAGTTGCTGATCCTCTGGTAAATGATGCTAGGACTGTCAGCATAAGAAATTTTAATAAAAATATCATGGAGGACAAGCGTGTAAGCATCAGTATGGTACCTATTGGAGACGGCATAACAATCTGCAGAAAAAGATGA 843 0.4353 MACSTAVNHSVLGLQRQIVGKRLSLLSLPAITNLGGIPRRRRSCHVYAHLQPSVVSDDPKYGNKQVITITPRLYDYILTNVREPEILRQLREETANMRGSQMQVSPEQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGYLVACERDSKSLEVAKRYYKQAGVSHKVDVKHGLASDALKSLILNGESGSYDFAFVDAEKRMNQEYFELLLQLVRTRGVIVIDNVLWHGKVADPLVNDARTVSIRNFNKNIMEDKRVSISMVPIGDGITICRKR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0767 280 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 280 IPR002935 GO:0008171
Vvi15g0767 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 280 IPR029063 -
Vvi15g0767 280 CDD AdoMet_MTases 123 228 - -
Vvi15g0767 280 Gene3D Vaccinia Virus protein VP39 56 280 IPR029063 -
Vvi15g0767 280 PANTHER O-METHYLTRANSFERASE-RELATED 63 279 - -
Vvi15g0767 280 Pfam O-methyltransferase 81 279 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0767 Vvi-Chr15 16407196 16410827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0767 1 268 Monolignol Biosynthesis Gene Families AT3G62000 69.373 2.09e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0767 - - vvi:100259246 540.806