Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0746 ATGTCACATACAAATTACTATATAATCAAAATCTATGTAAAAACTATTCTAATAGCTAGACACTATGTAAAAACTATTCTTATAGTCATAAAATATTTGCAAATTACAACTAAAAGATACACAATTCCAAAAGGATGGATTGTAGTGGTTTGTCCATCAGTGCCTCATTTGGATCCTACCAAGTACAAGGATCCATTTGCTTTCAATCCATGGCGATGGGAGGGGCAAGAATTGCATGCTGGGTCCAAAAATTTCATGGCATTTGGTGGAGGTGTGAGACTGTGTGCGGGGGCTCATTTTGCCAAGCTTCAAATGGCTATTTTTCTCCATTATTTGGTCACGAAATACAGGTACTTAATTTCTTTTTTCTTATTTTAA 378 0.3519 MSHTNYYIIKIYVKTILIARHYVKTILIVIKYLQITTKRYTIPKGWIVVVCPSVPHLDPTKYKDPFAFNPWRWEGQELHAGSKNFMAFGGGVRLCAGAHFAKLQMAIFLHYLVTKYRYLISFFLF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0746 125 PANTHER CYTOCHROME P450 26 35 116 - -
Vvi15g0746 125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 88 97 IPR017972 GO:0005506|GO:0016705
Vvi15g0746 125 SUPERFAMILY Cytochrome P450 38 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 PRINTS E-class P450 group IV signature 56 74 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 PRINTS E-class P450 group IV signature 95 113 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 PRINTS E-class P450 group IV signature 79 95 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 PRINTS E-class P450 group IV signature 40 54 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 Gene3D Cytochrome P450 15 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0746 125 Pfam Cytochrome P450 38 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0746 Vvi-Chr15 16088931 16091721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0746 35 118 Cytochrome P450 AT1G55940 67.857 8.55e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0746 - - rcu:8258282 148.673