Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0718 ATGAAAAAAAATATGAATACGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCGAAGGAAGTCCTCAAGTTGGGGGACTTTCCCCTTCCAACTCCGGCCCATAACCAAATACTTGTCCAAGTAAGAGCTGCTGCTTTGAATCCCATTGATTTCAAGAGACGCCAACGAGCCATCTTTCCTTCAGATTTTCCGGTTGTCCCTGGCTGTGATATGGCCGGCGTCGTGGTGGCAAGAGGCGACGGTGCAACAAAATTCGGTATAGGCGATGAGGTGTACGGCAACATCCAGGATTTCAATGCTGAGGGGAAGCTAAAGCAGCTGGGGACACTGGCGCAATTCATTGTCGTGGAGGAGAGCTTGGTTGCTTTGAAACCAAAGAACATTTCATTTGAAGAGGCTGCTAGCTTGCCTTTAGCAATTCAGACCGCGATTGAAGGCTTTGTGACCGCAGGTTTTAAGGGGGGGCAGACGGTATTCATAGTTGGCGGAGCAGGCGGTGTTGGAACTCTGGTCATTCAGCTGGCCAAGCACTTGTATGGAGCTTCTGAAGTGGTTGCTACAGCCAGCACTCCAAAGGTGGAGTTTGTGAAGAGTCTGGGCGCTGATAAAGTTGTGGACTACACAAAAACTAACTATGAAGAAATAACCGAAAAATTCGATTTTCTCTATGACACAATTGGTGACACCAAGAATTCCCATGTTGTAGCAAAGGCGGATGCTCCAATTGTTGACATAACTTGGCCACCGTCCCATCCAAGAGCGGTTTATTCAAGCTTGACTGTCTGTGGGGAGAGTCTGGAGAAGCTTAGGCCATACTTAGAGAGTGGAAAACTCAAGGCCATCATTGATCCAACCGGTCCTTACAAGTTCACAGCCGTAGTTGAAGCCTTCGGGTATTTGGAAACTGGAAGAGCCAGAGGAAAAGTCGTCGTCTCTCCCTTCCCTTCACTGCAACCTCCCCCTTTTGTTTTGTTGGATAACAAGGGCAATCCAGGCCCTTGA 1002 0.483 MKKNMNTQKAWFYEEYGPKEVLKLGDFPLPTPAHNQILVQVRAAALNPIDFKRRQRAIFPSDFPVVPGCDMAGVVVARGDGATKFGIGDEVYGNIQDFNAEGKLKQLGTLAQFIVVEESLVALKPKNISFEEAASLPLAIQTAIEGFVTAGFKGGQTVFIVGGAGGVGTLVIQLAKHLYGASEVVATASTPKVEFVKSLGADKVVDYTKTNYEEITEKFDFLYDTIGDTKNSHVVAKADAPIVDITWPPSHPRAVYSSLTVCGESLEKLRPYLESGKLKAIIDPTGPYKFTAVVEAFGYLETGRARGKVVVSPFPSLQPPPFVLLDNKGNPGP* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0718 333 Pfam Alcohol dehydrogenase GroES-like domain 35 94 IPR013154 -
Vvi15g0718 333 Pfam Zinc-binding dehydrogenase 199 311 - -
Vvi15g0718 333 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 5 314 IPR044626 GO:0016628
Vvi15g0718 333 Gene3D - 147 262 - -
Vvi15g0718 333 SMART PKS_ER_names_mod 17 311 IPR020843 GO:0016491
Vvi15g0718 333 CDD MDR_like_2 9 311 - -
Vvi15g0718 333 Gene3D - 15 311 - -
Vvi15g0718 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 283 IPR036291 -
Vvi15g0718 333 SUPERFAMILY GroES-like 8 160 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0718 Vvi-Chr15 15912985 15914679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0718 8 226 Monolignol Biosynthesis Gene Families AT3G19450 23.577 7.42e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0718 K18980 - vvi:104881870 668.307