Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0717 ATGGAGTTGTTCATCATCATAGCCACTTTCCTGCTACTGCCATTTCTGTTGTTCTTCATCGCTTTCTGCTTTCTTCTCCTTCGTATCTTCACCAACAAATCCATCAAAAACCCTAACTACCCACCTGTCATGGGAACTGTATTCCATCAGCTCCTTTATTTCAACAAACTGTACGACCATCAAGCGGAAGTCGCCGAGAAACATCGCACTTTCCGGCTTCTCACTCCCATTCAGAGTGAAATATACACGACGGATACCAGAAACATTGAGCACGTGCTCAAAACCAACTTCGCCAACTACTCCAAAGGCCAGCACAATCGGGATATATTTATGGATCTTTTCGGCGAAGGAATATTCGCTGTGGACGGCGGTGCGTGGCGGCACCAGAGGAAGCTTGCGAGCTTTGAGTTCTCCACCAGGGTTCTCAGGGACTTCAGCTGCGCCGTCTTTAGAACCAACGCCGCCAAACTTGCCGGGAAAGTCAAGGAGTTTTCGGATGCGGGTCGGGTTTTTGATGTACAGGATATACTAATGAAATGCGGATTGGATTCCATATTCAAAGTTGGGTTCGGAGTGGAATTGAATTGCTTGGAGGGCTCAAACCAAGAAGGAAATGCATTCATCAAAGCCTTCGATGATTCCAATGCTTTGGTCTACTGGCGCTACGTCGATCCTCTCTGGACTCTCAAAAGATTTCTCAACATCGGCTCCGAAGCCTCCCTCAAGAAAAGCATCAAGGTCATGGACGATTTCGTATACAACCTCATACGGACCAAAAGAAAACAGCTCTCCATCCAACAATACACTAATGACAAGGAAGACATTCTTTCTAGATTTCTGCTGGAGAGCCAGAAGGATCCGGAGCAGATGAATGATCGGTATCTTAGGGATATTATTCTGAATTTCACTATCGCTGGTAAAGATTCGACTGCAAATACTCTTTCATGGTTTTTCTATGTGCTTACCAAGCACCCTCTGGTGCAAGAAAAAGTTGTGCAAGAGATAAGAGAAGTGATGGACTGTGGAGATGATGATAAAGCTCATGGGTATGAAGATTTTGTGGCAAAAATCACTGATGGTGTGTTGGAGAAAATGCAGTATCTTCATGCAGCATTGACAGAGACATTGAGGCTATACCCTGCTGTCCCTATAGATGGGAGATGTGCAGATGCAGATGACATTCTTCCTGATGGCCATAAACTAAAACAAGGAGATGGGGTATACTACATGTCCTATGCCATGGGCAGGATGTCTTACATTTGGGGAGAAGATGCCAAGGAATTTCGCCCCGAAAGATGGCTCAACAATGGAGTTTTCCAACCCGAATCCCCATTCAAATTCGTAGCATTCCATGCTGGTCCTCGAATTTGTTTGGGCAAGGACTTCGCTTACAGGCAAATGAAGATATCAGCAATGACACTTCTTCACTTTTTCCGCTTTAAATTAGAGGATGCTACAAGAAATGTTACGTACAAGACCATGTTCACACTCCACATCAATGGAGGCCTCCATCTGCAGGCAATTCCAAGGAGAAACTTCTTATCTTCCAAGTAG 1554 0.4498 MELFIIIATFLLLPFLLFFIAFCFLLLRIFTNKSIKNPNYPPVMGTVFHQLLYFNKLYDHQAEVAEKHRTFRLLTPIQSEIYTTDTRNIEHVLKTNFANYSKGQHNRDIFMDLFGEGIFAVDGGAWRHQRKLASFEFSTRVLRDFSCAVFRTNAAKLAGKVKEFSDAGRVFDVQDILMKCGLDSIFKVGFGVELNCLEGSNQEGNAFIKAFDDSNALVYWRYVDPLWTLKRFLNIGSEASLKKSIKVMDDFVYNLIRTKRKQLSIQQYTNDKEDILSRFLLESQKDPEQMNDRYLRDIILNFTIAGKDSTANTLSWFFYVLTKHPLVQEKVVQEIREVMDCGDDDKAHGYEDFVAKITDGVLEKMQYLHAALTETLRLYPAVPIDGRCADADDILPDGHKLKQGDGVYYMSYAMGRMSYIWGEDAKEFRPERWLNNGVFQPESPFKFVAFHAGPRICLGKDFAYRQMKISAMTLLHFFRFKLEDATRNVTYKTMFTLHINGGLHLQAIPRRNFLSSK* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0717 517 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 CDD CYP86A 69 503 - -
Vvi15g0717 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vvi15g0717 517 Pfam Cytochrome P450 42 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 SUPERFAMILY Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PANTHER CYTOCHROME P450 27 503 - -
Vvi15g0717 517 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0717 517 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0717 Vvi-Chr15 15906789 15909327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0717 19 510 Cytochrome P450 AT2G45510 63.030 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0717 - - vvi:100259039 1018.45