Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0709 ATGGCAGAACTACTACACAACCCGGAAAAAATGGTAAAAGCTCAAAGGGAGCTCCAAGAAGTCCTTGGCAAGGATGGGATAGTTCAAGAATCAGACATCTCAAAGCTCCCTTACTTACAAGCCATAGTTAAAGAGACCTTTAGGTTGCACCCACTAGCCCCACTGCTAGTTCCCTATAAAGCTGAAACTGATGTAAAAATATGCGGCTTCACAGTTCCAAAGAATTCCCAAGTACTAATTAATGCATGGGATATCGGTTGTGATCCAAGCGTTTGGTCGAACCCGAATGCATTCATGCCTGAGAGGTTTCTGGGGTGTGATATTGATGTCAAAGGCCGGGATTTTGAGTTAATTCCATTTGGTGCTGGAAGAAGAATATGTCTTGCACTGCCATTAGCTCATAGGATGGTGCACCTGATATTGGTCTCTCTTCTTCATTCCTATGCTTGGAAGCTTGACGATGACCGGCCGATTCATCGGTTACCAAGCACTTGGCCCAACCCAAATGCATTCATGCCTGAGAGGTTTCTAGAGTGTGATATTAATGTCAAAGGCCGAGATTTTGAGTTGATTCCATTTGGTGCTAGAAGAAGAATATGTCCTGGCATGCCATTAGCTCATAGGATGGTGCACCTGATGTTGACCTATCTTCTTTATTCCCATGCTTGGAAGCTTGAAGATGGTATGAAACCAGAAAATATGGACATGAGTGAGAAGTTTGGGCTTACATTACAGAAGGCCCAGCCTCTACGGGCTATTCCCATCAACGTTTAA 774 0.4406 MAELLHNPEKMVKAQRELQEVLGKDGIVQESDISKLPYLQAIVKETFRLHPLAPLLVPYKAETDVKICGFTVPKNSQVLINAWDIGCDPSVWSNPNAFMPERFLGCDIDVKGRDFELIPFGAGRRICLALPLAHRMVHLILVSLLHSYAWKLDDDRPIHRLPSTWPNPNAFMPERFLECDINVKGRDFELIPFGARRRICPGMPLAHRMVHLMLTYLLYSHAWKLEDGMKPENMDMSEKFGLTLQKAQPLRAIPINV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0709 257 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Vvi15g0709 257 SUPERFAMILY Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 Gene3D Cytochrome P450 158 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 Pfam Cytochrome P450 158 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 Pfam Cytochrome P450 2 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 FunFam Predicted protein 1 157 - -
Vvi15g0709 257 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 155 - -
Vvi15g0709 257 FunFam Os06g0641800 protein 158 252 - -
Vvi15g0709 257 SUPERFAMILY Cytochrome P450 158 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0709 257 Gene3D Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0709 Vvi-Chr15 15775420 15776714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0709 158 255 Cytochrome P450 AT2G45550 58.163 1.46e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0709 - - vvi:100264296 318.546