Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0708 ATGGCAGAGTTACTATGCAACCCGGAAAAAATGGCAAAAGCTCAAAAGGAGATCCGAGGAGTCCTTGGGAATGAAGGGATAGTTCAAGAATCAGACATCTCAAAGCTCCATTACTTACAAGCCATAGTTAAAGAGACCTTTAGGTTGCACCCACCCGGCCCACTGCTACTTCCCCATAAAGCTGAAACTGATGTAGAAATATGCGGCTTCACAGTTCCAAAGAATTCCCAAGTACTAGTTAATGTATGGGCTATCGGTCGAGATCCAAGCACTTGGTTGAACCCAAATGCATTCGTGCCTGAGAGGTTTTTGGGGTTTGATATTGATGTCAAACGCCGAGATTTTGAGTTGATTCCATTTGGTGCAGGAAGAAGAATATGTCTTGGACTGCCATTAGCTCATAGGATGGTGCACCTGATATTGGCCTCTCTTCTTCATTCCTATGCTTGGAAGCTTGACGATGTCCCCACAACCAGCTCTTCCACAGGCCCACTTTCTCTCTTCTCCCACTTCCATCGGCCACCTCACCATCGTTCTCCGTCGATAACAGCGGTGCTGGAGTCCGGCGACTCTGCCTCCTCCTCATGTTGCTCAGTTCCATCTCCGGCAAGAACTTGGGGGATCCTACCGACGACTACAAGATGCAATCCATCTCTGTAA 660 0.4788 MAELLCNPEKMAKAQKEIRGVLGNEGIVQESDISKLHYLQAIVKETFRLHPPGPLLLPHKAETDVEICGFTVPKNSQVLVNVWAIGRDPSTWLNPNAFVPERFLGFDIDVKRRDFELIPFGAGRRICLGLPLAHRMVHLILASLLHSYAWKLDDVPTTSSSTGPLSLFSHFHRPPHHRSPSITAVLESGDSASSSCCSVPSPARTWGILPTTTRCNPSL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0708 219 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Vvi15g0708 219 Gene3D Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 Pfam Cytochrome P450 2 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0708 219 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 154 - -
Vvi15g0708 219 SUPERFAMILY Cytochrome P450 1 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0708 Vvi-Chr15 15760510 15761917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0708 1 152 Cytochrome P450 AT2G45550 70.395 2.68e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0708 - K20556 vvi:100259121 308.531