Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0705 ATGAAGGATCTCTTTGTTGCGGGAACTGACACGATTTCAAGCACAGTAGAGTGGGCAATGGCAGAGTTACTAAGCAACCCGGAAAAAATGGCAAAAGCTCAAAAGGAGATCCGAGGAGTCCTTGGGAATGAAGGGATAGTTCAAGAATCAGACATCTCGAAGTTCCCTTACTTACAATCCATAGTTAAAGAAACCTTTCGGTTGCACCCACCAGCCCCACTGCTAGTTCCCCATAAAGCTGCAACTGATGTAGAAATATGTGGCTTCATACTTCCAGAGAATTCACAGGCACTAGTTAATGCATGGGCTATTGGTCGAGATCCAAGCACTTGGTCGAATCCAAATGCATTCATGCCTGAGAGGTTTTTAGAGTGTGATATTGATGTCAAAGGCCGAGATTTTGAGTTGATTCCATTTGGTGTTGGAAGAAGAATATGTCCTGGAATGCCATTAGCTCATAGGATGGTGCACCTGATGTTGGCCTCTCTTCTTCATTAA 498 0.4398 MKDLFVAGTDTISSTVEWAMAELLSNPEKMAKAQKEIRGVLGNEGIVQESDISKFPYLQSIVKETFRLHPPAPLLVPHKAATDVEICGFILPENSQALVNAWAIGRDPSTWSNPNAFMPERFLECDIDVKGRDFELIPFGVGRRICPGMPLAHRMVHLMLASLLH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0705 165 Gene3D Cytochrome P450 1 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS E-class P450 group I signature 146 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 FunFam Predicted protein 5 165 - -
Vvi15g0705 165 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Vvi15g0705 165 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 165 - -
Vvi15g0705 165 SUPERFAMILY Cytochrome P450 2 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0705 165 Pfam Cytochrome P450 3 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0705 Vvi-Chr15 15703656 15707230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0705 3 165 Cytochrome P450 AT2G45550 69.325 1.11e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0705 - K20556 vvi:100266067 315.849