Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0704 ATGGCAGAATTGTTAAACAACCCTAATTTAATGGCAAAAGCTCGAAGTGAGCTCGGCAAAGTCGTAGGCAAAGAAAAGATGGTTGAAGAGTCAGACATCTCAAAGCTCCCTTATTTACAAGCAGTAGTAAAAGAAACCTTCAGGTTGCACCCACCTGTCCCATTTCTGGTTCCTAGAAAGACCGAAATGAAGTCAGAAATATTAGGCTATGCAGTGCCAAAAAATGCTCATGTACTTGTCAATGTATGGGCTATTGGCAGAGACTTCACGATATGGTCCAACCCTAATTCATTTGTGCCTGAAAGGTTTTTGGAGTGCGAGATTGATGTCAAGGGTCGAGATTTCCGGCTCATTCCATTTGGTGCTGGAAGAAGAATCTGTCCTGGGTTGCTATTAGGCCATAGGATGGTCCACTTGATGTTGGCTTCTCTTCTTCACTCCTTTGATTGGAAGCTTGAAGATGGTCTGAAACCAGAAGACATGGACATGACTGAGAAGTTTGGATTTACATTGAGGAAAGCCCAACCTCTCCAGGCTGTTCCCATCAAGCCATAG 555 0.4378 MAELLNNPNLMAKARSELGKVVGKEKMVEESDISKLPYLQAVVKETFRLHPPVPFLVPRKTEMKSEILGYAVPKNAHVLVNVWAIGRDFTIWSNPNSFVPERFLECEIDVKGRDFRLIPFGAGRRICPGLLLGHRMVHLMLASLLHSFDWKLEDGLKPEDMDMTEKFGFTLRKAQPLQAVPIKP* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0704 184 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Vvi15g0704 184 FunFam Os10g0167200 protein 1 180 - -
Vvi15g0704 184 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 SUPERFAMILY Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 Gene3D Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0704 184 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0704 Vvi-Chr15 15697208 15697762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0704 1 183 Cytochrome P450 AT2G45550 62.842 4.24e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0704 - K20556 vvi:104877399 376.711