Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0702 ATGGATTACACCACACTTCTCCTTCTATTTTCCTTTGTATGGTCATGCGTTAAAGTGCTCACTATTGGCTTCACCAATAGGAAATCCGGTGTGGCCAGGCTTCCGCCAGGTCCCCGCCCTTTCCCGATCATCGGAAACCTCCTCAAACTGGGCGAAAAACCCCATCAATCACTTACAATTCTCTCCAAAACTTATGGTCCTCTAATGTCTCTCAAGCTAGGAAGCACCACCACCATAGTCGTTTCCTCATCAGAAGCAGCCCAGGAAGTGCTAAACAAAAATGACCAAGCCTTTTCCAGCAGGACAGTCCTCAATGCCATCCAAGTTGCCGACCATCACCATTTTTCAATAGTATTTTTACCAGCATCGGCTCATTGGCGCAACCTCAGGAAGATTTGCAGCAAGCAGATGTTTTCCTCGCATCGTGTCGAAGCCGGCCAAGCCATGCGGGAAAACATTGTCCAACAGCTACTAGGCCATGCTCAGGAAAGTTGCAGCAGCGGCCGGGCAGTCGATATTGGGAGAGCAACCTTTACAACCACCCTTAATTTGTTATCAAACACTATTTTCTCTGTTAATTTGGCTCACTATAATTCCAATTTCTCACAAGAGTTCAAGGATCTTATATGGAGTATAATGGAAGAAGCTGGAAAGCCTAACCTCGCAGACTTCTTTCCGGTTCTTAGATTGGTTGATCCACAAGGAATACTGAGAAGGATGACGGTTTGTTTTAATAAACTTGTCGAGGTTTTTGATGGTTTCATCGAACAAAGGTTGCCATTAAAAGCTTCTTCGGCAAACAACGATGTACTAGATGGCCTCCTCAATCTCGACAAACAACATGACCATGAGTTGAGCAGCAACGATGTCAGACATTTGCTTGTGGACCTATTCTCTGCGGGAACTGACACTACTTCGAGCACGGTAGAGTGGGCAATGGCAGAATTGTTAAACAACCCTAATTTAATGGCAAAAGCTCGAAGTGAGCTCGGCAAAGTCGTAGGCAAAGAAAAGATGGTTGAAGAGTCAGACATCTCAAAGCTCCCTTATTTACAAGCAGTAGTAAAAGAAACCTTCAGGTTGCACCCACCAGTCCCATTTCTGGTTCCTAGAAAGACCGAAATGAAGTCAGAAATATTAGGCTATGCAGTGCCAAAAAATGCTCATGTACTTGTCAATGTATGGGCTATTGGCAGAGACTCCACGATATGGTCCAACCCTAATTCATTTGTGCCTGAAAGGTTTTTGGAGTGCGAGATTGATGTCAAGGGTCGAGATTTCCAGCTCATTCCATTCGGTGCTGGAAGAAGAATCTGTCCTGGATTGCTATTAGGCCATAGGATGGTCCACTTGATGTTGGCTTCTCTTCTTCACTCCTTTGATTGGAAGCTTGAAGATGGTCTGAAACCAGAAGATATGGACATGACTGAGAAGTTTGGATTTACATTGAGGAAAGCCCAACCTCTCCAGGCTGTTCCCATCAAACCATAG 1491 0.4494 MDYTTLLLLFSFVWSCVKVLTIGFTNRKSGVARLPPGPRPFPIIGNLLKLGEKPHQSLTILSKTYGPLMSLKLGSTTTIVVSSSEAAQEVLNKNDQAFSSRTVLNAIQVADHHHFSIVFLPASAHWRNLRKICSKQMFSSHRVEAGQAMRENIVQQLLGHAQESCSSGRAVDIGRATFTTTLNLLSNTIFSVNLAHYNSNFSQEFKDLIWSIMEEAGKPNLADFFPVLRLVDPQGILRRMTVCFNKLVEVFDGFIEQRLPLKASSANNDVLDGLLNLDKQHDHELSSNDVRHLLVDLFSAGTDTTSSTVEWAMAELLNNPNLMAKARSELGKVVGKEKMVEESDISKLPYLQAVVKETFRLHPPVPFLVPRKTEMKSEILGYAVPKNAHVLVNVWAIGRDSTIWSNPNSFVPERFLECEIDVKGRDFQLIPFGAGRRICPGLLLGHRMVHLMLASLLHSFDWKLEDGLKPEDMDMTEKFGFTLRKAQPLQAVPIKP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0702 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 495 - -
Vvi15g0702 496 CDD CYP76-like 62 493 - -
Vvi15g0702 496 FunFam Cytochrome P450 76C4 26 492 - -
Vvi15g0702 496 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vvi15g0702 496 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 SUPERFAMILY Cytochrome P450 35 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0702 496 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0702 Vvi-Chr15 15688774 15691309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0702 6 495 Cytochrome P450 AT2G45550 51.406 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0702 - - vvi:100252376 978.393