Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0701 ATGCTTTCCTTGCCTCGTATTGACGCCTGCAGAGCCCTGCGCCGAAGAATTGTGCAACAACTCCTAGATCATGCTCATGAAAGTTGCACCAGCAGCCGGGCAGTCGACATTGGCAGAGCGGCCTCAACAACCGCCCTCAATTTGTTATCAAACACCATTTTCTCTGTTGATTTGGCTCACTATGATTCCAATTTTTCACAAGAGTTCAAGGATCTAGTGTGGAGTATAATGGAAGAAGCTGGAAAGCCTAATCTTGCAGACTTTTTTCCAGGGCTTAGTTTCATTGATCCACAAGGAATACAGAAAAAGATGACAGCCAATTTTTATAAACTAGTCAAGGTTTTTGATGGCATCATCGATCAACGGTTGCAATTAAAGGCTTCTTCGGCAAACAATGATGTACTGGATTCCCTCCTCAATCTCAACAAACAACATGACCATGAGTTGAGTAGCAACGATATCAAACATCTGCTTGTGGACCTATTTTCTGCGGGAACTGACACCACTTCGAGCACGGTAGAGTGGGCAATGGCGGAATTATTGAACAACCCAAAAGCAATGGCAAAAGCTCGAAGTGAGCTGGATGAAGTGCTAGGCAAAGGCATGATAGTTGAAGAATCGGACATTTCAAAGCTTCCTTATTTACAAGCAGTAGTAAAAGAAACCTTCAGATTGCACCCACCAGTCCCATTTCTGGTTCCTAGAAAGACCGAAATGGAGTCAGAAATATTAGGCTATGCAGTGCCAAAAAATGCTCAAGTTCTTGTCAATGTATGGGCTATTGGCCGAGATCCCATGTTGTGGACCAACCCTAATTCATTTGTGCCTGAAAGGTTTTTGGAGTGCGAGATCGATGTCAAGGGTCGAGATTTCCAGCTCATTCCATTTGGTGCTGGAAGAAGAATCTGTCCTGGATTGCTATTAGGCCATAGGATGGTCCACTTGATGTTGGCTTCTCTCCTTCACTCCTTTGACTGGAAGCTTGAAGATGGTATGAAACCAGAAGACATGGACATGACTGAGAAGTTCGGATTTACATTGAGGAAGGCCCAACCTCTCCAGGCCGTTCCCATCAAACCATAA 1083 0.4441 MLSLPRIDACRALRRRIVQQLLDHAHESCTSSRAVDIGRAASTTALNLLSNTIFSVDLAHYDSNFSQEFKDLVWSIMEEAGKPNLADFFPGLSFIDPQGIQKKMTANFYKLVKVFDGIIDQRLQLKASSANNDVLDSLLNLNKQHDHELSSNDIKHLLVDLFSAGTDTTSSTVEWAMAELLNNPKAMAKARSELDEVLGKGMIVEESDISKLPYLQAVVKETFRLHPPVPFLVPRKTEMESEILGYAVPKNAQVLVNVWAIGRDPMLWTNPNSFVPERFLECEIDVKGRDFQLIPFGAGRRICPGLLLGHRMVHLMLASLLHSFDWKLEDGMKPEDMDMTEKFGFTLRKAQPLQAVPIKP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0701 360 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 257 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 293 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 173 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 153 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS E-class P450 group I signature 303 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 359 - -
Vvi15g0701 360 Pfam Cytochrome P450 11 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 CDD CYP76-like 1 357 - -
Vvi15g0701 360 FunFam Geraniol 8-hydroxylase 104 356 - -
Vvi15g0701 360 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 296 305 IPR017972 GO:0005506|GO:0016705
Vvi15g0701 360 PRINTS P450 superfamily signature 217 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS P450 superfamily signature 294 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 PRINTS P450 superfamily signature 164 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 Gene3D Cytochrome P450 3 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0701 360 SUPERFAMILY Cytochrome P450 4 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0701 Vvi-Chr15 15655036 15656979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0701 1 359 Cytochrome P450 AT2G45550 56.986 8.97e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0701 - K26037 vvi:100252376 610.912