Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0698 ATGGATTACACCCCACTTGTTCTTCTACTTCTTCTTCCTTCCTTTGTCTGGTTATGCTTCCATTTCCTCATCCTTGGCTCCACCCATCGGAAATCCTTCCAAGCCAGGCTTCCGCCGGGCCCCCGCCCTCTACCCATCATCGGGAACCTCCTTGAACTCGGGGACAAGCCCCACCATTCATTCACTACTCTTTCCAAAAAGTATGGCCCTTTGATGTCTCTCAAGCTAGGAAGCATCACCACCATAGTCATTTCCTCTCCAGAAACAGCCCAACAAGTGCTAAACAAAAAAGACCAAACCTTTTCCGGCAGGACAGTTCCCAATGCCATCCAAGTTGCCAGCCATCACCATTTTTCAATAGGGTTTTTACCAGCATCGGCTCATTGGCGGAACCTCAGGAAGATTTGCAGCATGCAGATATTTTCCTTGCAACGTGTTGACGCCTTCCATGGCCTGCGCCAAAAAGTTGTGCAACAACTTCTGGATCATGCTCATGAAAGTTGCAGCAGCGGTCGGGCAGTCGATATTGGCAGAGCAGCCTTCACAATCGCCCTCAACCTTTTATCGAACACTGTTTTCTCTGTTGATTTGGCTCACTATGATTCCAATTTGTCACAAGAGTTCAAGGAACTTATATGGAGTATACTGGTAGAAGTTGGAAAGCCTAATCTTGCAGACTTCTTTCCGGGCCTTAGATTGGTTGATCCACAAGGAATACATAAAAGGATGTCGGTTTATTTTAATAAACTGTTCGACGTTTTTGACAGTTTTATCAATCAAAGGTTACAGTTACGAGCTTCTTCCACAGACAACGATGTATTAGACGCCCTCCTCAATCTCAACAAACAGCATGACCATGAGTTGAGCTGCAATGATATCAGACATCTGCTTGTGGACCTATTTTCTGCGGGGACAGACACCACTTCGAGCACGATAGAGTGGGCAATGGCTGAGTTATTAAACAACCCTAAGGCAATGGCGAAAGCTCGAGATGAACTCAGTCAAGTCGTAGGCAAAGACAGGATAGTTGAAGAATCAGACATCTCAAAGCTCCCTTATCTACATGCAGTAGTGAAAGAAACCTTCAGGTTGCACCCACCCGCTCCATTCCTACTCCCCAGAAAGGCAGAAATGGACTCAGAAATTTTAGGTTATGCGGTGCCCAAGAATGCACAAGTCATCATCAATGTGTGGGCTATTGGCAGAGATTCGAAGACATGGTCGGACCCACATTCTTTTGGGCCCGAAAGGTTTTTGGAGTGTGATATTGATGTCAAGGGCCGAGATTTCCAACTCATTCCCTTCGGCGCTGGAAGAAGAATCTGTCCTGGATTGCTTTTAGGCCGTAGGATGGTGCACTTGGTGTTGGCTTCTCTTCTTCACTCCTTTGATTGGAAACTTGAAGGTGGTATGAAACCGGAAGACATGGACATGAGTGAGACGTTTGGGTTTTCAGTACGAAAAGCCCAACCCCTCCGGGTTGTTCCTATCAAACCGTGA 1500 0.466 MDYTPLVLLLLLPSFVWLCFHFLILGSTHRKSFQARLPPGPRPLPIIGNLLELGDKPHHSFTTLSKKYGPLMSLKLGSITTIVISSPETAQQVLNKKDQTFSGRTVPNAIQVASHHHFSIGFLPASAHWRNLRKICSMQIFSLQRVDAFHGLRQKVVQQLLDHAHESCSSGRAVDIGRAAFTIALNLLSNTVFSVDLAHYDSNLSQEFKELIWSILVEVGKPNLADFFPGLRLVDPQGIHKRMSVYFNKLFDVFDSFINQRLQLRASSTDNDVLDALLNLNKQHDHELSCNDIRHLLVDLFSAGTDTTSSTIEWAMAELLNNPKAMAKARDELSQVVGKDRIVEESDISKLPYLHAVVKETFRLHPPAPFLLPRKAEMDSEILGYAVPKNAQVIINVWAIGRDSKTWSDPHSFGPERFLECDIDVKGRDFQLIPFGAGRRICPGLLLGRRMVHLVLASLLHSFDWKLEGGMKPEDMDMSETFGFSVRKAQPLRVVPIKP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0698 499 Gene3D Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 498 - -
Vvi15g0698 499 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vvi15g0698 499 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0698 499 CDD CYP76-like 65 496 - -
Vvi15g0698 499 FunFam Cytochrome P450 76C4 29 495 - -
Vvi15g0698 499 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0698 Vvi-Chr15 15595607 15598545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0698 1 498 Cytochrome P450 AT2G45550 50.198 8.15e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0698 - K26037 vvi:100255672 984.556