Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0691 ATGCCATCACGCCAACCGCCATTTTCGCCGGCCCCGTCGCCGGTGACCCACCGCCACCGGCCCAATCTTGTCCCACCAGTCGTTGGTGGGACAGTTGCTCTTTCACTCCTCGCCTTCCTTGTTGTCATCCTGTACCGGAAACTTTCTCGAAGCCGCACGGTTCCGGCGGATCTCAAACCACCGCATCGGTTTTCGTACTCGCTCCTCCGTCGCGCCACGTCGTCGTTTTCGCCGTCGAATAGGCTCGGGCAGGGTGGGTTCGGATCGGTCTACAAGGGTGTTCTGCCATCCGGTCAAGAGGTTGCTGTGAAGCTCATGGACTCCGGCTCGCTCCAAGGGGAGCGGGAGTTCAACAACGAGCTCTCGCTCGCCGGGAAAGTCGTCGACTGTGAATATGTGGTGAGGATCCAGGGCTTCTCCTCTGACCGCCGGCGCCGGAGACTGGTTCTGGTGTATGAGCTCATGACGAACCGAAGCTTGCAAGACGCCTTGTTGGATCGGAAGTGCGTGGAGCTGATGCAGTGGAAGAAGAGGTTCGCTATTGCAATCGATATAGCAAAGGGTCTTCAGTATCTGCACAGTTATTGTGACCCGTCCATCATTCATGGCGATATCAAGCCCAGTAATATTCTCCTTGATGGCGATTTCAATGCGAAAATTGCTGATTTTGGATTGGCAAGGTGTACGGGTGTAGATGGTGATTTAGAGGGTCTGGTGGAAGGCGAGAGGAAGAAGAAAGAGGGATTAGACGCCGTGGGTGTGGAGGATAATGGGTCGATTCTTGAAGAGACTGAGAGTGTCTTGACTGTGGGAATTGAGGACGGTGGTGCTGGTGCCGGCGATCCTGATCCGTCGCCGGAGAGTTGCGTGAGAGCTCAGGATGTGGAAACGGCGACATCACCGGAGATAGATATGGGGTTGGACAAGGCGAGTACATTGGAGAGCTGTTTCGATAAGATGAGTGTTGATAGTGGGAAAGAAATCATTGGTTGTGGGAAGGGGAAAGGTGGCCGGAAAAAGGGCGATTCCGGGAGGGATTGGTGGTGGAGACAGGACAGTGGATGGGGGTCTGAATCTGGGAGGGTGAAGGATTACGTAATGGAGTGGATTGGGAGTGAGATAAGGAAGGAGAGGCCGAAAAACGAGTGGGTTGAGTCATCAGGACCCCTAGAGGATCATGGTTTGAGCACAAAAAATGAGCCGAAGAAAAGGAAGAAGAGGTTGGAATGGTGGGCTTCATTGGACGAGGACAAAATTAGGAAGAAGGAGAAGAACAGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGTGAGGAACTTTCCAGGAAGAACAAGAAAAAGAGAACCCTTAAGTCGAGTATTGGTGGCGATGGGGAGCTGTGGTGGCAGAGGGATGAAGAATCTGTAGAGACAAGGAAGAAAAGGAAAAGCAGGAGTAGTAGAAGTATCGATTGGTGGTTGGATGGGCTGAGCGGTGAGCTTAGAAATGGGCGAAGGAATAGCCAGGATTGGATGAGCGGAGAAATTCCCAAGAGCGGTGGGGTTAGTAGTACACCTAGTATGAGAGGAACAATGTGCTACATTGCCCCTGAATATGGTGGAGGAGGGCAGCTCTCTGAGAAGTGTGATGTATACAGTTTTGGTGTTCTGCTATTAGTTTTGATTTCGGGTCGAAGACCCCTCCAAGTAACAGCCTCACCAATGTCAGAATTCGAGCGGGCGAACCTCATTTCATGGGCTCGTCAGCTTGCTCGCAATGGGAAGCTTTTGGATCTTGTTGATACTTCAATTCAGTCATTGGATCGAGAACAGGGGTTGCTCTGCATCACAATTGCACTCCTCTGTCTGCAGAGGTCACCGGCTAAGCGGCCCTCCATGAATGAAATTGTTGGGATGCTTTCTGGTGAGACTGAGCCACCCCACCTGCCATTTGAATTTTCCCCATCACCACCTTCCAATTTTCCTTTCAAATCCAGGAAGAAGATGGCTCGGAAAAAAAAAATATATACATATTTCATGAATTCAAACTCTCATTTTACTTGGTTGTTTAGATGTGTTGCTAGGCCCTATAATTTCTTCTTCAACGGTTCAACCGTTACCTTTTTTGGAGTACCATGA 2118 0.509 MPSRQPPFSPAPSPVTHRHRPNLVPPVVGGTVALSLLAFLVVILYRKLSRSRTVPADLKPPHRFSYSLLRRATSSFSPSNRLGQGGFGSVYKGVLPSGQEVAVKLMDSGSLQGEREFNNELSLAGKVVDCEYVVRIQGFSSDRRRRRLVLVYELMTNRSLQDALLDRKCVELMQWKKRFAIAIDIAKGLQYLHSYCDPSIIHGDIKPSNILLDGDFNAKIADFGLARCTGVDGDLEGLVEGERKKKEGLDAVGVEDNGSILEETESVLTVGIEDGGAGAGDPDPSPESCVRAQDVETATSPEIDMGLDKASTLESCFDKMSVDSGKEIIGCGKGKGGRKKGDSGRDWWWRQDSGWGSESGRVKDYVMEWIGSEIRKERPKNEWVESSGPLEDHGLSTKNEPKKRKKRLEWWASLDEDKIRKKEKNRKPREWWKEEFCEELSRKNKKKRTLKSSIGGDGELWWQRDEESVETRKKRKSRSSRSIDWWLDGLSGELRNGRRNSQDWMSGEIPKSGGVSSTPSMRGTMCYIAPEYGGGGQLSEKCDVYSFGVLLLVLISGRRPLQVTASPMSEFERANLISWARQLARNGKLLDLVDTSIQSLDREQGLLCITIALLCLQRSPAKRPSMNEIVGMLSGETEPPHLPFEFSPSPPSNFPFKSRKKMARKKKIYTYFMNSNSHFTWLFRCVARPYNFFFNGSTVTFFGVP* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0691 705 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Vvi15g0691 705 MobiDBLite consensus disorder prediction 380 401 - -
Vvi15g0691 705 ProSiteProfiles Protein kinase domain profile. 76 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0691 705 SUPERFAMILY Protein kinase-like (PK-like) 57 678 IPR011009 -
Vvi15g0691 705 Gene3D Transferase(Phosphotransferase) domain 1 155 247 - -
Vvi15g0691 705 Gene3D Transferase(Phosphotransferase) domain 1 489 639 - -
Vvi15g0691 705 PANTHER OS07G0586332 PROTEIN 1 662 IPR044576 -
Vvi15g0691 705 Gene3D Phosphorylase Kinase; domain 1 48 154 - -
Vvi15g0691 705 MobiDBLite consensus disorder prediction 497 520 - -
Vvi15g0691 705 Pfam Protein kinase domain 518 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0691 705 Pfam Protein kinase domain 79 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0691 705 SMART serkin_6 76 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0691 705 FunFam Os07g0541700 protein 155 238 - -
Vvi15g0691 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0691 Vvi-Chr15 15537179 15539404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0691 23 232 Receptor kinase-like Gene Family AT4G04500 40.741 3.99e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vvi15g0691 Pkinase 1.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0691 - - vvi:100248891 1241.87