Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0690 ATGGCAGACTCTGTGCCACCACCATCTTCCATGGACGCTTATAAGTCCCTCGGCCTCGTCCCTAACCCAGATGGCTCTCTCACTCGCAGTAGCCCATTTCCCTCTGTACCCGCTACTGATGAAACCACCGCCGCCACCGACACCGCTGTGGCTTTTTCCAAAGACGTGCCCCTCAACCCCGCCAACAACACCTTTCTCCGCATCTACCGGCCTAGTCTTCTTCCTCCAAACACCAAGCTTCCCGTCATCTTGTACTTTCATGGAGGTGGGTTCGTTCTCTTCAGCGTCTCTAATCTGCCTTTCCACAAATCTTGCAACTCCATGGCAGCTAAGCTTCCAGCTCTGGTCCTGTCCCTCGAGTACCGTCTCGCGCCGGAGCACCGTCTCCCGGCTGCCTACGAGGACGCCTTCGAAGCCATCATGTGGGTCCGGAGCCAGGCGGCTGCGGAGATCGACGGTGGTGAGCCGTGGCTGAGAGAGTACGCTGATTTTTCCAAGTGCTTTTTGATGGGGGGCAGTGCAGGAGCAAACATCGTGTTCCACGCAGGTGTGCGTGCACTTGATGCTGATCTTGGGGCGATGAAGATCCAAGGGCTGGTACTGAATCAGCCCTACTTCGGTGGGGTGGAGAGGACCGAATCGGAACTGAGACTGGCGGACGATCGGATCGTGCCGTTGCCGGCGAACGATCTGCTATGGGCACTTGCATTGCCCAACGGCGCTGATCGTGATCATGAGTATAGTAATCCAATGGCGGGAGGGTCCCAGTCCCACCAGGAGAAGATCGGACGGCTGCAGAAGTGTCTGGTGAGAGGGTACGGTGGGGATCCACTGGTTGACAGACAGAGGAGGTTTGCGGAGATGATGGAGGCGCGTGGGGTGCACGTGGTGGCTAAATTCAATGATGGCGGTCACCATGGCGTGGAGATCTTTGATCCCTCACAGGCTGAAGCTTTGTATAATGATGTCAAGAATTTCATTTACTCCACCGCTTCAAAATCAACCATGTGA 1011 0.5608 MADSVPPPSSMDAYKSLGLVPNPDGSLTRSSPFPSVPATDETTAATDTAVAFSKDVPLNPANNTFLRIYRPSLLPPNTKLPVILYFHGGGFVLFSVSNLPFHKSCNSMAAKLPALVLSLEYRLAPEHRLPAAYEDAFEAIMWVRSQAAAEIDGGEPWLREYADFSKCFLMGGSAGANIVFHAGVRALDADLGAMKIQGLVLNQPYFGGVERTESELRLADDRIVPLPANDLLWALALPNGADRDHEYSNPMAGGSQSHQEKIGRLQKCLVRGYGGDPLVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEIFDPSQAEALYNDVKNFIYSTASKSTM* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0690 336 Gene3D alpha/beta hydrolase 14 334 IPR029058 -
Vvi15g0690 336 SUPERFAMILY alpha/beta-Hydrolases 13 327 IPR029058 -
Vvi15g0690 336 Pfam alpha/beta hydrolase fold 83 308 IPR013094 GO:0016787
Vvi15g0690 336 PANTHER ARYLACETAMIDE DEACETYLASE 29 308 - -
Vvi15g0690 336 MobiDBLite consensus disorder prediction 23 40 - -
Vvi15g0690 336 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0690 Vvi-Chr15 15519982 15520992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0690 24 328 Carbohydrate Esterase AT5G16080 33.544 3.15e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0690 - - vvi:100260783 673.315