Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0688 ATGGACGCTTATAACTCCATCGGCCTCGTCCCTAACCCAGATGGCTCTTTCACTCGCCGTAGCTCACATCTCTCCCTAGCTGCTACTGATGAAACCGCCGCCTCCGACTCCGCCGTGGCTTTTTCCAAAGATGTGCCTCTCAACCCCGCCAACAACACCTTTCTCCGCCTCTTCCGGCCTCGTCTTCTTCCTCCAAACACCAAGCTTCCAGTCATCTTGTACTTTCATGGAGGTGGGTTCGTTGTCGCCAGCGTCTCTACTCCGCCTTTCCATGAAACTTGCAACTCCATGGCAGCTAAGCTTCCAGCTCTGGTCCTGTCCCTCGAGTACCGTCTCGCGCCGGAGCACCGTCTCCCGGCTGCCTACGAAGACGCCGCCGAAGCCATCATGTGGGTCCGGAGCCAGGCGGCTGCGGAGATCGACGGCGGTGAGCCGTGGTTGAGAGAGTACGCTGATTTTTCCAAGTGCTTTTTGATGGGGGGCAGTGCAGGAGCAAACATGGTGTTCCACGCAGGTCTACGTGCACTTGATGCTGATCTTGGGGCGATGAAGATCCAAGGGCTGGTACTGAATCAGCCCTACTTCGGTGGGGTGGAGAGGACCGAATCGGAACTGAGACTGGCGGAGGGTCGGAACTTGCCGTTGCCGGCCAACGATCTGTTATGGGCACTTGCATTGCCCGACGGCGCTGATCGTGATCATGAGTACAGTAATCCACTGGCGGGAGGGTCCTACCAGGAGAAGATCGGACGGCTACAGAAGTGTCTGGTGATAGGGTACGGTGGAGATCCACTGGTTGACAGACAGAGGAGGGTTGTGGAGATGATGGAGGCGCGTGGGGTGCACGTGGTGGCGAAATTCAAAGATGGCGGCCACCATGGCATAGAGTGCTCTGATCCCTCACACGCTGAAGCCATGGATGATGATGTCAAGGATTTCATTGACTCCACGCTCCATGATTTTGACCCAAAGCATTAA 978 0.5654 MDAYNSIGLVPNPDGSFTRRSSHLSLAATDETAASDSAVAFSKDVPLNPANNTFLRLFRPRLLPPNTKLPVILYFHGGGFVVASVSTPPFHETCNSMAAKLPALVLSLEYRLAPEHRLPAAYEDAAEAIMWVRSQAAAEIDGGEPWLREYADFSKCFLMGGSAGANMVFHAGLRALDADLGAMKIQGLVLNQPYFGGVERTESELRLAEGRNLPLPANDLLWALALPDGADRDHEYSNPLAGGSYQEKIGRLQKCLVIGYGGDPLVDRQRRVVEMMEARGVHVVAKFKDGGHHGIECSDPSHAEAMDDDVKDFIDSTLHDFDPKH* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0688 325 Gene3D alpha/beta hydrolase 4 320 IPR029058 -
Vvi15g0688 325 PANTHER ARYLACETAMIDE DEACETYLASE 23 295 - -
Vvi15g0688 325 Pfam alpha/beta hydrolase fold 72 294 IPR013094 GO:0016787
Vvi15g0688 325 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 72 87 IPR002168 GO:0016787
Vvi15g0688 325 SUPERFAMILY alpha/beta-Hydrolases 42 305 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0688 Vvi-Chr15 15505772 15506749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0688 35 321 Carbohydrate Esterase AT5G16080 34.471 6.60e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0688 - - vvi:100260853 633.254