Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0687 ATGGCAGACTCTGCGCCACCACCATCCTCCCTGGACTCTTATGAGTCCGTCGGCCTCGTCCCTAACCCAGATGGCTCTGTCACTCGCAGTATCGCATTTCCCTCAGTAGCCGCTACTGATGAAACCGCCGCCACCGACTCCGCCGTGGCTTTTTCCAAAGATGTGCCTCTCAACCCCGCCAACAACACCTTTCTCCGCCTCTTCCGGCCTCGTCTTCTTCCTCCAAACACCAAGATTCCCGTCATCTTGTACTTTCATGGAGGTGGGTTCGTTCTCGCCAGCGTCTCTGCTCTGCCTTTCCATGAAACTTGCAACTCCATGGCAGCTAAGGTTCCAGCTCTGGTCCTGTCCCTTGAGTACCGTCTCGCGCCGGAGCACCGTCTCCCGGCGGCCTACGAAGACGCCGTCGAAGCCATCATGTGGGTCAGGAGCCAGGCGGCTGCGGAGATCGACGGCGGTGAGCCGTGGCTGAGAAAGTACGCTGATTTTTCCGAGTGCTTTTTGATGGGGGGCAGTGCAGGAGCAAACATAGTGTTCCACGCAGGTGTACGTGCACTTGATGCTGATCTTGGGGCGATGAAGATCCAAGGGCTGATACTGAATCAGCCCTACTTCGGTGGGGTGGAGAGGACCGAATCGGAACTGAGACTGGCGGACGATCGGATCGTGCCGTTGCCGGCGAACGATCTGCTATGGGCACTTGCATTGCCCGACGGCGCTGATCGTGATCATGAGTACAGTAATCCTCTGTCGGGAGGGTCCTACCAGGAGAAGATCGGACGGCTACAGAATTGTCTGGTGATAGGGTACAGTGGAGATCCACTGATTGACAGACAGAGGAGGGTTGTGAAGATGATGGAGACTCGTGGGGTGCACGTGGTGGCGAAATTCAAAGATGGCGGCCACCATGGCATAGAGTGCTATGATCCCTCACACGCTGAAGCCATGGATGATGATGTCAAGGATTTCATTGACTGCACGCTCCATAATTTTGACCCAAAGCATTAA 1008 0.5585 MADSAPPPSSLDSYESVGLVPNPDGSVTRSIAFPSVAATDETAATDSAVAFSKDVPLNPANNTFLRLFRPRLLPPNTKIPVILYFHGGGFVLASVSALPFHETCNSMAAKVPALVLSLEYRLAPEHRLPAAYEDAVEAIMWVRSQAAAEIDGGEPWLRKYADFSECFLMGGSAGANIVFHAGVRALDADLGAMKIQGLILNQPYFGGVERTESELRLADDRIVPLPANDLLWALALPDGADRDHEYSNPLSGGSYQEKIGRLQNCLVIGYSGDPLIDRQRRVVKMMETRGVHVVAKFKDGGHHGIECYDPSHAEAMDDDVKDFIDCTLHNFDPKH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0687 335 Pfam alpha/beta hydrolase fold 82 304 IPR013094 GO:0016787
Vvi15g0687 335 SUPERFAMILY alpha/beta-Hydrolases 51 315 IPR029058 -
Vvi15g0687 335 PANTHER ARYLACETAMIDE DEACETYLASE 29 305 - -
Vvi15g0687 335 Gene3D alpha/beta hydrolase 14 328 IPR029058 -
Vvi15g0687 335 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 82 97 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0687 Vvi-Chr15 15485351 15486358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0687 24 331 Carbohydrate Esterase AT5G16080 36.076 2.03e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0687 - - vvi:100255710 660.218