Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0676 ATGCAGGAGACAATAGAACGATATCAACGGCACACAAAAGATGTTCATACCAACAACTACAAGACTACCGAACATAACATGCAGCATTTGAAGCATGAAGCAGCAAATATGGCAAAGAAGATAGAGCTTCTTGAAATTTCCAAACGGAAACTCTTAGGAGAAGGTTTGGGGTCATGCTCCATTGAAGAACTACAACAGATAGAACAACAGTTGGAGCGCAGCGTAAGCAGCATCCGAGCAAGAAAGAATCAGGTTTTCAAGGAACAAATCGAGCAACTGAAAGAAAAGGAGAAAGCCCTAGCAGCTGAAAATGCAATGCTGTGTGAAAAGTGTGGGGTGCAACCGTATCAAGCTCCGAATCAAGAGAATGAAACTTTGCCTAGTGCAGAGAGAAGCCAAAATTCAGATGTCTCCACTGACTTGTTCATTGGACTGCCTGAGGGGAGAGCCAAGCGCCTCCTATTGGGAAACTGA 474 0.4409 MQETIERYQRHTKDVHTNNYKTTEHNMQHLKHEAANMAKKIELLEISKRKLLGEGLGSCSIEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENAMLCEKCGVQPYQAPNQENETLPSAERSQNSDVSTDLFIGLPEGRAKRLLLGN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0676 157 Coils Coil 20 47 - -
Vvi15g0676 157 MobiDBLite consensus disorder prediction 1 20 - -
Vvi15g0676 157 Pfam K-box region 23 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vvi15g0676 157 Coils Coil 83 110 - -
Vvi15g0676 157 ProSiteProfiles K-box domain profile. 27 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vvi15g0676 157 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0676 Vvi-Chr15 15396923 15398782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0676 1 98 MADS-box Gene Family AT2G45660 74.490 3.79e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0676 - - vvi:100232995 281.567