Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0672 ATGTCAAGGTCATCTCCATGTATGCATTCCAACCTTCTTCTTCTTCTGATCGTCTTTGCAGGTCTTACCCTCATTAACGCCGAGAAGAAGTTTTACATCGTATACTTTGGAGATAGACCTGAAAGCATAGAAGCCACAGTTCAAACACATCAGGACATCCTCTCACAATGTGGTGTTGATACTGAGGAATCCATAGTCTACAGCTACACCAAGAGCTTCAATGCATTGGCTGCGAAGCTGTCTGAGGATGAAGCCCAAAAGCTATCAGAAATGGAAGGGGTTGTTTCTGTTTTTCCAAATCGGTACCACAAGCTTCACACAACAAAATCATGGGATTTCATTGGACTACCTCAAACAGCAAGAAGGCAATTGAAACAGGAGAGCAACATTATTGTGGGGCTACTGGATACAGGGATCACGCCGCAGTCAGAGAGCTTTGCGGATAATGGCCTGGGTCCGCCGCCGGCCAAATGGAAGGGGACTTGTCTCCGCTTTGCTAATTTCTCAGGGTGTAACCACAAGCTCATAGGAGCCAAATACTTCAAGCTGGATGGCAACTCCGACCCTGATGACATCTTATCTCCGGTGGACGTTGAGGGTCATGGCACCCACACAGCTTCCACCTCAGCAGGAAACATCGTCCAGAACGCAAACCTTTTTGGCCTGGCTAAGGGGACTGCACGTGGGGCTGTGCCTTCAGCTAGGGTTGCCATGTACAAGGTATGTTGGGTCCGCTCAGGCTGCTCGGACATGGACATTCTTGCTGCATTTGAGGCTGCCATTGCCGATGGCGTCGACATTATCTCCATCTCGATTGGTGGGGTTTCCCCCAATTATGCAGAGGACTCCATAGCTATTGGGGCTTTTCATGCCATGAAGAAAGGGATCCTCACTGTAGCTTCTGCCGGAAATGATGGACCCAGTCAGAGTAGTATTGTAAATCATGCACCGTGGATTTTCACGGTGGGGGCTAGCAGCATTGATCGAGGGTTTAGGAGCAAAGTTGTGCTGGGCAATGGACAAACCTTCTCGGGTATTGGAGTGAGTACATTCGATCCGAAGCAGCAGAACCCTCTGGTAAGTGGTGCAGATGTAGCCAAGACTGCTGCGGACAAAGAGAACTCAAGGTTCTGCATTGAAAACTCATTGGATCCTACTAAGGTGAATGGCAAGCTGGTCTACTGCAAGCTACAAATGTGGGGATCCGACTCTGTGGTTAAAGGACTTGGAGGGATTGGAACTATTGTTGAAAGCATGGAGTTTCTTGATGCTGCCCAGATCTTCATGGCACCAGGAACTATGGTTAATGACACCGTTGGATATGCCATTAATCGTTATATACATTCCACAAAAACACCATCAGCAGTGATACAAAGGTCCGAGGAAGTAAAAGTCCCGGCTCCCTTTGTGGCTTCATTCTCATCGAGAGGTCCAAACCCTATGACCCAACACATACTCAAGCCTGATATTGTAGCACCTGGGATTGACATATTGGCGTCCTACACCCCTTTGAGGTCGCTAACCGGGCTGAAGGGCGACACCCAGTTCTCCAAATTTACGCTCTTGTCTGGCACTTCCATGGCGTGTCCACACGTTTCTGGAGTAGCAGCCTATGTAAAGTCTTTCCACCCGAAGTGGTCTCCTGCTGCCATCAGATCCGCCATCATGACCACTGCAAAACCGATGAGCAGGAAGGTGAACAATGATGCTGAATTCGCCTATGGTACTGGCCAAGTAAACCCTCATAGAGCTCTGAGCCCCGGCCTCATCTATGACACGGATGAGATGTCTTACATCCAGTTCCTATGCCATGAGGGCTATAGCGGCAAAGCTATCGCCACCATTGTTGGTTCAAAATCCATAAACTGTTCCTCACTGCTCCCCGGACAAGGCAGTGATGCTCTCAACTATCCCACCATGCAGCTAAGCTTGAAAGACACTAATGAACCCACAGTAGGCGTCTTCCGGAGGAGAGTGACCAATGTGGGTCCTGCTCAATCTGTCTATAATGCCACCATTAAAGCTCCCCAAGGAGTGGAAATAACTGTGACACCTACCAGGCTTGTCTTCTCCCGGGCCCTGCAAGCACGAAGTTTCAAGGTTGTGGTGAAGGCAAAATCGACTGCTTTTAAGGAAATGGTATCGGGTTCGCTCACATGGAGAAGCCCTAGACACATTGTGAGGAGCCCTATTGTGATTTATAAACCATGA 2211 0.4894 MSRSSPCMHSNLLLLLIVFAGLTLINAEKKFYIVYFGDRPESIEATVQTHQDILSQCGVDTEESIVYSYTKSFNALAAKLSEDEAQKLSEMEGVVSVFPNRYHKLHTTKSWDFIGLPQTARRQLKQESNIIVGLLDTGITPQSESFADNGLGPPPAKWKGTCLRFANFSGCNHKLIGAKYFKLDGNSDPDDILSPVDVEGHGTHTASTSAGNIVQNANLFGLAKGTARGAVPSARVAMYKVCWVRSGCSDMDILAAFEAAIADGVDIISISIGGVSPNYAEDSIAIGAFHAMKKGILTVASAGNDGPSQSSIVNHAPWIFTVGASSIDRGFRSKVVLGNGQTFSGIGVSTFDPKQQNPLVSGADVAKTAADKENSRFCIENSLDPTKVNGKLVYCKLQMWGSDSVVKGLGGIGTIVESMEFLDAAQIFMAPGTMVNDTVGYAINRYIHSTKTPSAVIQRSEEVKVPAPFVASFSSRGPNPMTQHILKPDIVAPGIDILASYTPLRSLTGLKGDTQFSKFTLLSGTSMACPHVSGVAAYVKSFHPKWSPAAIRSAIMTTAKPMSRKVNNDAEFAYGTGQVNPHRALSPGLIYDTDEMSYIQFLCHEGYSGKAIATIVGSKSINCSSLLPGQGSDALNYPTMQLSLKDTNEPTVGVFRRRVTNVGPAQSVYNATIKAPQGVEITVTPTRLVFSRALQARSFKVVVKAKSTAFKEMVSGSLTWRSPRHIVRSPIVIYKP* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0672 736 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Vvi15g0672 736 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Vvi15g0672 736 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Vvi15g0672 736 Gene3D - 602 735 - -
Vvi15g0672 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 106 IPR037045 -
Vvi15g0672 736 CDD Peptidases_S8_3 103 559 IPR034197 -
Vvi15g0672 736 ProSiteProfiles Serine proteases, subtilase domain profile. 110 585 - -
Vvi15g0672 736 Pfam Peptidase inhibitor I9 32 106 IPR010259 -
Vvi15g0672 736 CDD PA_subtilisin_like 335 457 - -
Vvi15g0672 736 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Vvi15g0672 736 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Vvi15g0672 736 Gene3D - 328 463 - -
Vvi15g0672 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Vvi15g0672 736 SUPERFAMILY Subtilisin-like 105 589 IPR036852 GO:0004252|GO:0006508
Vvi15g0672 736 FunFam Subtilisin-like protease SBT5.3 22 106 - -
Vvi15g0672 736 Pfam Fibronectin type-III domain 635 733 IPR041469 -
Vvi15g0672 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 732 IPR045051 -
Vvi15g0672 736 FunFam Subtilisin-like protease SBT1.5 129 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0672 Vvi-Chr15 15340783 15344226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0672 29 573 Subtilisin-like Serine Gene Family AT4G00230 63.934 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0672 - - vvi:100259224 1449.11