Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0667 ATGACTTCAGTTCAGAAACAAGAGGTTGAAGAAGAAGACGATACGAGAGCCGTTGATCTCAGAATTAACGGTGGAGAAAACGCGGAGTCAATTGATCACAAGAAAGACGACAACAGAGCTCCATCTTCAGACCCACCTTCGGCGGCGCAACCACAAGAACAACCAGTGGCGGCGGTTGCGGCGATTTCGTTGAAGGCAGAGCCTGATGCAGAGGAGAGGTCTCCGGCGGCACCGCCAGCTATGGGGGTGGTGCCGGTGGCCATGCCGATGCCGGTGCAAGTGCGGAGGCCGGCGCCTCCGGTAAAGAGGGCGTCGACGAAGGACCGGCACACGAAGGTAGAGGGACGCGGGCGGAGGATCCGAATGCCCGCGACATGCGCGGCCCGAATCTTCCAACTGACGCGAGAGCTCGGCCACAAATCAGACGGCGAAACCATTCGGTGGCTCCTAGAACACGCCGAGCCGGCAATAATCGCCGCCACCGGCACCGGCACAGTTCCAGCTATCGCCATGTCCGTCGGCGGGACCCTCAAGATCCCCACCACCTCAACCGCCACCACCCAAGAACCCGACCCCAACAAAAAGAAACGTAAACGACCTGCCAACAGTGAGTTCGTCGACGTTAACGATGCCGTTTCAGTCTCCTCCGGCCTTGCCCCAATCGCTACCCCGTTAGCTCCCCAAGGGCTCGTACCCATGTGGGCCATACCATCAAACGCCGTCGGCGCATTCTGGATGGTCCCGCCTACCACCGCCATTGCCGGGCCTTCGAACCAGCCTCAGATATGGACGTTTCCTCCAACTGCGACGCCTCTCATCAACATCTCCGCGAGACCCATTTCTTCTTTCGTCTCATCCATGCATCCTACAATCAACGTAGCCTCTGCAACAGCTTCAGCAGCTTCCACAGTCGGTGTCAAAGCTTCAAAAGCTTCATCAACCATGATGCTAAGAGACTTCTCTCTGGAGATTTACGATAAACAAGAGCTTCAGTTCATGTCTCGCTCCTCAAAGCATTGA 1020 0.5706 MTSVQKQEVEEEDDTRAVDLRINGGENAESIDHKKDDNRAPSSDPPSAAQPQEQPVAAVAAISLKAEPDAEERSPAAPPAMGVVPVAMPMPVQVRRPAPPVKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTSTATTQEPDPNKKKRKRPANSEFVDVNDAVSVSSGLAPIATPLAPQGLVPMWAIPSNAVGAFWMVPPTTAIAGPSNQPQIWTFPPTATPLINISARPISSFVSSMHPTINVASATASAASTVGVKASKASSTMMLRDFSLEIYDKQELQFMSRSSKH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0667 339 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 285 IPR005333 GO:0003700
Vvi15g0667 339 MobiDBLite consensus disorder prediction 101 116 - -
Vvi15g0667 339 Pfam TCP family transcription factor 105 191 IPR017887 -
Vvi15g0667 339 MobiDBLite consensus disorder prediction 1 41 - -
Vvi15g0667 339 MobiDBLite consensus disorder prediction 96 116 - -
Vvi15g0667 339 ProSiteProfiles TCP domain profile. 106 160 IPR017887 -
Vvi15g0667 339 MobiDBLite consensus disorder prediction 180 203 - -
Vvi15g0667 339 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0667 Vvi-Chr15 15268480 15269562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0667 1 339 TCP Transcription Factor Family AT2G45680 49.364 2.04e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vvi15g0667 TCP 2.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0667 - - vvi:100245358 580.482