Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0657 ATGTCTGCCTTGAATTCTTCATTCTCATACACCGACAATTCGATGCAAAGAAGGCATTTTCAAATCGAGCGTAGACCTCGAATGCTGAAAGATTTCCTTATAGACGATTCGAATTCATGTTCGTCAAACGGATTCAAATCCTTTCCTCGCAAAGCGAGCCACTGTACCGTACGGAACCTTCTCGAGTGCGATGGCGGAGAAAGAGGATCAAATTCAAACAATAAAAGTACATTTCTCAGAAGCCGATCCACGGCAGCGGCGACGACAATCTCGGCGTTTCAGAAGGCTTCGGAGATCGTGATCAACGCCGTTAAGTCGCCGTCGTTTTTACAAAGAAGCCTGAAACGGAGGTTTTGGAGGAGGAATAGTACCGAGGAGCGGGGGATGACGGTAACAGTTATTAGAGTTAAGGATATTGTGCGGATGAGATCGTTCCGAGACGTGATGGAGGAGAAATCAGCACCGTCGGATTCAACGGGGTCCATCACCACCACCGCCACAACCAGTAGTAACGGTTCTAGCTGGTGCGGGAGTGATTTTACCGCGGATTATGTGCAGTCGTGGAGCGGCAACTCCGAGGAGTACTCAGGTGCGAATGCGGTCAAAGTGGGAGAAAAGTATTTACCAGGTGTCGGCGACGGGAATGCAAATACGACAACGAGGACGACAATGAGCATCGATGCGGTGGGCCCCAAGGGTGAGTTACGATGTGAGGAGAAAGAGCAGCACAGCCCTGTTTCAGTACTTGATTGTCCCTTCACTGAAGATGCAGAGCCATTCTCCTTTTTCATTCGGGATGAAGAAGAAGAAGAAGCCGAAGAGAAGGCAATGCAGCTACTGGATCAAGTGAAAGCAGCGGGGTCGGTAGAATTTAGTAAAGCCAATTTGAATGATGATCTATTATTAGAGTTCTTCAGAGATGAATTGATGAAAATAAGCAGAGGAAATCAAACCGTGGATAAGGAAGTAGATGCCGAGATATTGAAGATAGCAGAAGCTTGGTTGAAGGGAGAGTTTGAATGGGGCGTGGAGACTGAGAAGGAGGCTTGTATTAGAGATATGGAGAGGGGAGGGAGGTGGCGAAAGTTTGAGGAGGAAGAGGAAGAAATGGCTTTGGAGCTGGAGGTCTTAGTGTTTGAAATTTTGGAGGATGAGCTTTTGGGTGATTTGTTTGTAAATTAG 1182 0.4729 MSALNSSFSYTDNSMQRRHFQIERRPRMLKDFLIDDSNSCSSNGFKSFPRKASHCTVRNLLECDGGERGSNSNNKSTFLRSRSTAAATTISAFQKASEIVINAVKSPSFLQRSLKRRFWRRNSTEERGMTVTVIRVKDIVRMRSFRDVMEEKSAPSDSTGSITTTATTSSNGSSWCGSDFTADYVQSWSGNSEEYSGANAVKVGEKYLPGVGDGNANTTTRTTMSIDAVGPKGELRCEEKEQHSPVSVLDCPFTEDAEPFSFFIRDEEEEEAEEKAMQLLDQVKAAGSVEFSKANLNDDLLLEFFRDELMKISRGNQTVDKEVDAEILKIAEAWLKGEFEWGVETEKEACIRDMERGGRWRKFEEEEEEMALELEVLVFEILEDELLGDLFVN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0657 393 MobiDBLite consensus disorder prediction 154 173 - -
Vvi15g0657 393 MobiDBLite consensus disorder prediction 150 173 - -
Vvi15g0657 393 PANTHER OS04G0572500 PROTEIN 265 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0657 Vvi-Chr15 15172324 15173891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0657 266 390 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.576 1.77e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0657 - - vvi:100854402 714.531