Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0649 ATGTCTTCGTCTTCCAAGCTTGTCTTGTATTCTTACTGGCAGAGCTCGTGCGCTTGGCGCGTCCGCTTTGCTTTGAACCTCAAAGGACTTGCTTATGAGTATAGATCAGTCAACCTTAGAAAGGGAGAGCAGTTTAGTCCAGAGTTCAAGAAATTAAATCCTCTTTGTTTTGTTCCGGTGTTAGTTGATGGCGATATTGTGGTTTCAGACTCTTTTGCAATCTTACTGTATCTGAACGAGAAGTATCCTCAAAATGCATTATTGCCTTCTGATCCTCAACTAAGAGCTCTCAATCTCCAGGCTTCGAATATTGTTAGCAGCAGTATGCAACCTCTCATTATGCAGTCAATTCTGAAGTATATTGAGGACAAATTTGGTCCCGCAGAACGACAATTATGGGTTCGACATAATACAGAAAAAGGTTTCCAAGCTCTTGAGAAGTTGCTGAAAGATTATGCCGGCACATACGCAACAGGAGAAGAAGTTTATATGGCTGATGTGTTTTTGGCTCCACAAACTGCTGTAGCTGAGATGAGGTTTAATATTGACATGTCCAAGTTCCCTACTTTGAATGGGATATACAAGTCATGCAAGGATTTACCAGAATTCCAAGCCTCTGTGCCAGAAAGACAACCCGATGCTGAACTGTAA 651 0.4178 MSSSSKLVLYSYWQSSCAWRVRFALNLKGLAYEYRSVNLRKGEQFSPEFKKLNPLCFVPVLVDGDIVVSDSFAILLYLNEKYPQNALLPSDPQLRALNLQASNIVSSSMQPLIMQSILKYIEDKFGPAERQLWVRHNTEKGFQALEKLLKDYAGTYATGEEVYMADVFLAPQTAVAEMRFNIDMSKFPTLNGIYKSCKDLPEFQASVPERQPDAEL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0649 216 FunFam Zeta class glutathione transferase GSTZ1 5 88 - -
Vvi15g0649 216 PANTHER MALEYLACETOACETATE ISOMERASE 7 214 - -
Vvi15g0649 216 SUPERFAMILY Thioredoxin-like 5 89 IPR036249 -
Vvi15g0649 216 Pfam Glutathione S-transferase, N-terminal domain 15 80 IPR004045 -
Vvi15g0649 216 CDD GST_C_Zeta 92 211 IPR034330 -
Vvi15g0649 216 Gene3D Glutaredoxin 9 86 - -
Vvi15g0649 216 CDD GST_N_Zeta 7 78 IPR034333 -
Vvi15g0649 216 FunFam Maleylacetoacetate isomerase 90 216 - -
Vvi15g0649 216 Gene3D - 88 215 - -
Vvi15g0649 216 SFLD Main (cytGST) 7 198 - -
Vvi15g0649 216 SUPERFAMILY GST C-terminal domain-like 87 214 IPR036282 -
Vvi15g0649 216 NCBIfam maleylacetoacetate isomerase 9 214 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vvi15g0649 216 SFLD Glutathione Transferase (cytosolic) 7 198 IPR040079 -
Vvi15g0649 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Vvi15g0649 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0649 Vvi-Chr15 15085283 15090711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0649 5 214 Glutathione S-transferase Gene Family AT2G02380 56.667 9.99e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0649 K01800 - vvi:100260848 433.721