LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi15g0649	ATGTCTTCGTCTTCCAAGCTTGTCTTGTATTCTTACTGGCAGAGCTCGTGCGCTTGGCGCGTCCGCTTTGCTTTGAACCTCAAAGGACTTGCTTATGAGTATAGATCAGTCAACCTTAGAAAGGGAGAGCAGTTTAGTCCAGAGTTCAAGAAATTAAATCCTCTTTGTTTTGTTCCGGTGTTAGTTGATGGCGATATTGTGGTTTCAGACTCTTTTGCAATCTTACTGTATCTGAACGAGAAGTATCCTCAAAATGCATTATTGCCTTCTGATCCTCAACTAAGAGCTCTCAATCTCCAGGCTTCGAATATTGTTAGCAGCAGTATGCAACCTCTCATTATGCAGTCAATTCTGAAGTATATTGAGGACAAATTTGGTCCCGCAGAACGACAATTATGGGTTCGACATAATACAGAAAAAGGTTTCCAAGCTCTTGAGAAGTTGCTGAAAGATTATGCCGGCACATACGCAACAGGAGAAGAAGTTTATATGGCTGATGTGTTTTTGGCTCCACAAACTGCTGTAGCTGAGATGAGGTTTAATATTGACATGTCCAAGTTCCCTACTTTGAATGGGATATACAAGTCATGCAAGGATTTACCAGAATTCCAAGCCTCTGTGCCAGAAAGACAACCCGATGCTGAACTGTAA	651	0.4178	MSSSSKLVLYSYWQSSCAWRVRFALNLKGLAYEYRSVNLRKGEQFSPEFKKLNPLCFVPVLVDGDIVVSDSFAILLYLNEKYPQNALLPSDPQLRALNLQASNIVSSSMQPLIMQSILKYIEDKFGPAERQLWVRHNTEKGFQALEKLLKDYAGTYATGEEVYMADVFLAPQTAVAEMRFNIDMSKFPTLNGIYKSCKDLPEFQASVPERQPDAEL*	217

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi15g0649	216	FunFam	Zeta class glutathione transferase GSTZ1	5	88	-	-
	Vvi15g0649	216	PANTHER	MALEYLACETOACETATE ISOMERASE	7	214	-	-
	Vvi15g0649	216	SUPERFAMILY	Thioredoxin-like	5	89	IPR036249	-
	Vvi15g0649	216	Pfam	Glutathione S-transferase, N-terminal domain	15	80	IPR004045	-
	Vvi15g0649	216	CDD	GST_C_Zeta	92	211	IPR034330	-
	Vvi15g0649	216	Gene3D	Glutaredoxin	9	86	-	-
	Vvi15g0649	216	CDD	GST_N_Zeta	7	78	IPR034333	-
	Vvi15g0649	216	FunFam	Maleylacetoacetate isomerase	90	216	-	-
	Vvi15g0649	216	Gene3D	-	88	215	-	-
	Vvi15g0649	216	SFLD	Main (cytGST)	7	198	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi15g0649	Vvi-Chr15	15085283	15090711	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi15g0649	5	214	Glutathione S-transferase Gene Family	AT2G02380	56.667	9.99e-84	246

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi15g0649	K01800		-	vvi:100260848	433.721

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