Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0633 ATGGCTTCAGGTGCATACAGAAACGGCGTGCATAAAGGTGCCCCTGCAGCCTCGAACTTCAAATCCTCTTCCTTCAAATCGAAGCATCCGCCGGTAGCCGCTCCGGGATCTGGTCTTCGCCGGAGCAGTTCCACTTCTCTCGGCGCCGCTTCTGGAAGTCTTAAGGACGACGGAGGAGTTCCGGGCAGAGTTCGAGTAGCAGTCAGATTGCGGCCCCGAAATGCAGAGGAGTTGGTGGCAGATGCAGATTTTGCTGATTGTGTAGAATTGCAGCCAGAGCTTAAGAGGTTGAAACTTCGAAAAAACAATTGGGATTCAGACACCTATGAATTTGATGAGGTTCTCACAGAGTTTGCATCACAGAAGCGTGTTTATGAAGTTGTTGCTAAGCCTGTTGTGGAGAGTGTTCTGGATGGTTACAATGGGACAGTGATGGCTTATGGTCAGACTGGTACAGGAAAAACTTTTACTCTTGGACGACTGGGAGAGGAAGATACTTCTGCTCGTGGAATAATGGTCCGTTCAATGGAGGACATTCTAGCAGATCTCTCTCCAGAGACTGATTCTGTATCGGTTTCATATTTGCAGCTTTATATGGAAACCATCCAAGACCTCCTTGATCCAGCAAATGATAATATTCCCATTGTAGAAGATCCAAGAACTGGTGATGTCTCACTGCCAGGGGCAACTGTTGTAGAAGTTAGGGACCAGCAGAGTTTTATGGAGCTACTACGTATAGGGGAAACTCATAGGATCGCTGCCAATACCAAGTTGAATACTGAATCCTCTCGCAGTCATGCTCTTCTAATGGTTAATGTTAAGAGGTCTGTCATGGGAAGAGAAGCTGCACTTTCAAGTGAAGATGACAACTCCTCTCACTTGGTCAAACCTTTTAAGCCCCTTGTTCGGAAGGGCAAGCTAGTTGTGGTGGATCTCGCAGGTTCAGAGCGTATTCAGAAGTCAGGAAGTGAGGGACACACGTTAGAAGAAGCAAAATCTATCAATCTTTCACTGAGTGCATTAGGGAAATGCATAAATGCACTAGCAGAGAACAGTGCTCATGTACCGGTTCGTGATTCTAAACTTACAAGGTTACTTAGAGATTCATTTGGAGGCACGGCAAGAACTTCATTAATCGTGACTATTGGCCCGTCTCCACGCCATAGAGGAGAGACTGCAAGTACCATATTGTTTGGACAGAGGGCTATGAAGGTGGAGAATATGTTGAAAATAAAGGAAGAATTTGACTATAAAAGTTTGTCTAGAAGGCTTGACATACAACTGGACAAACTCATTGCAGAAAATGAAAGACAACAAAAAGCTTTTGAGGAGGAAGTTGAAAGAATAACATTAGAAGCACAAAAGCGTGTCTCTGAGGTCGAAAGGAACTATGCGGATGCATTGGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAATCAGTTAAGCAGCTGGAGGAAAAATTAGTGACAAATCAAAAGAAGTGGTGTAATGGAGAGGGCCCTGGGGTGTCTGGTGCTGAGGAACTTGCAGAGGTAAAAAAGTTGCTTCAAAATGAAATTCATCTAAGAAAAGCTGCTGAAGAGGAGGTTGACTATCTTAAGAATCGGTTAGGGCAATTTACACAGCCAGAGGCAGGTGGAAATTCAGAGATTCTAAAGCTCCGCAAAAGTCTTGAGGATGAAGCTCACAAAAAAAAGAAGCTTGAAGAAGAAATAACAATACTACAAAGTCAGCTGTTGCAATTAACATTTGAAGCTGATCGGATGAGAAGATGTCTTGAGAGAGGAGGATCTGGAAATGCTTTTACCGGTCTTGATTCTCTTATGTCTCAAGTTGGGCATTTGCACCTTAAAGATGCAGGAAATGGACAGAGGGCATCGATTGCAACACTCTCTGAACAAGTTGGATTGCAAAAGGTCTTGTCACTGCTTGAGTCAGAAGATGCTAATGTACGGATTCATGCTGTAAAAGTTGTGGCGAACCTAGCAGCTGAAGAAGCCAATCAGGAAAAGATTGTAGAAGCTGGTGGTCTCTCTTCCTTGCTGATGCTTCTTAGAAGGTTTGAGGATGAAACTGTACGCAGGGTAGCAGCAGGTGCAATTGCCAATCTTGCAATGAATGAAGCCAATCAGGAACTCATTATGGTTGAAGGGGGAATTAGTTTGTTGTCAATGACGGCAGCTGAGGCTGAGGATCCTCAAACTCTACGCATGGTTGCTGGGGCCATTGCTAATCTATGTGGCAATGATAAGCTACAGATGAAGCTGAGGTCTGAAGGTGGTATCAAGGCTTTGCTAGGAACAGTGAGATGTGGGCATCCAGATGTTCTCTCTCAAGTTGCACGTGGAATTGCGAACTTTGCAAAATGCGAGTCTCGAGCATCTAGTCAAGGGACAAAAACTGGAAGATCTTTTCTGATAGAAGATGGTGCACTGCAATGGATTGTACAAAATGCCAACAATGAAGCATCACCAATAAGACGCCACATCGAGCTTGCACTCTGCCACTTGGCTCAACATGGTAAGTGGACCTCAACCTTCCTGCTGAGAAAGCCTAAATTTTCTGGCAACATGTTCCTGAAGACAACTTTGAATCTTTTAATCTGCAGAAGTGAATGCAAAGGACATGATCAGTGGGGGTGCCCTCTGGGAGCTAGTGCGTATCTCACGGGACTGTTCTCGGGAGGATATTAG 2700 0.447 MASGAYRNGVHKGAPAASNFKSSSFKSKHPPVAAPGSGLRRSSSTSLGAASGSLKDDGGVPGRVRVAVRLRPRNAEELVADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEEDTSARGIMVRSMEDILADLSPETDSVSVSYLQLYMETIQDLLDPANDNIPIVEDPRTGDVSLPGATVVEVRDQQSFMELLRIGETHRIAANTKLNTESSRSHALLMVNVKRSVMGREAALSSEDDNSSHLVKPFKPLVRKGKLVVVDLAGSERIQKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPVRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLDIQLDKLIAENERQQKAFEEEVERITLEAQKRVSEVERNYADALEKERLKCQMEYMESVKQLEEKLVTNQKKWCNGEGPGVSGAEELAEVKKLLQNEIHLRKAAEEEVDYLKNRLGQFTQPEAGGNSEILKLRKSLEDEAHKKKKLEEEITILQSQLLQLTFEADRMRRCLERGGSGNAFTGLDSLMSQVGHLHLKDAGNGQRASIATLSEQVGLQKVLSLLESEDANVRIHAVKVVANLAAEEANQEKIVEAGGLSSLLMLLRRFEDETVRRVAAGAIANLAMNEANQELIMVEGGISLLSMTAAEAEDPQTLRMVAGAIANLCGNDKLQMKLRSEGGIKALLGTVRCGHPDVLSQVARGIANFAKCESRASSQGTKTGRSFLIEDGALQWIVQNANNEASPIRRHIELALCHLAQHGKWTSTFLLRKPKFSGNMFLKTTLNLLICRSECKGHDQWGCPLGASAYLTGLFSGGY* 900
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0633 899 Pfam Kinesin motor domain 69 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 637 679 IPR000225 GO:0005515
Vvi15g0633 899 Gene3D Kinesin motor domain 57 436 IPR036961 -
Vvi15g0633 899 FunFam Kinesin-like protein 55 435 - -
Vvi15g0633 899 ProSitePatterns Kinesin motor domain signature. 305 316 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi15g0633 899 Coils Coil 421 470 - -
Vvi15g0633 899 PANTHER CENTROMERE PROTEIN E 63 649 IPR027640 GO:0003777|GO:0007018
Vvi15g0633 899 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 PRINTS Kinesin heavy chain signature 355 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 PRINTS Kinesin heavy chain signature 306 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 Gene3D - 517 847 IPR011989 -
Vvi15g0633 899 MobiDBLite consensus disorder prediction 1 56 - -
Vvi15g0633 899 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 678 721 IPR000225 GO:0005515
Vvi15g0633 899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 441 IPR027417 -
Vvi15g0633 899 SUPERFAMILY ARM repeat 627 844 IPR016024 -
Vvi15g0633 899 Coils Coil 553 587 - -
Vvi15g0633 899 CDD KISc 63 403 - -
Vvi15g0633 899 SMART kinesin_4 61 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 ProSiteProfiles Kinesin motor domain profile. 63 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi15g0633 899 SMART arm_5 626 666 IPR000225 GO:0005515
Vvi15g0633 899 SMART arm_5 709 750 IPR000225 GO:0005515
Vvi15g0633 899 SMART arm_5 667 708 IPR000225 GO:0005515
Vvi15g0633 899 SMART arm_5 751 791 IPR000225 GO:0005515
Vvi15g0633 899 FunFam Kinesin-like protein 616 798 - -
Vvi15g0633 899 Pfam Armadillo/beta-catenin-like repeat 670 707 IPR000225 GO:0005515
Vvi15g0633 899 Coils Coil 511 538 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi15g0633 Vvi-Chr15 14918249 14935686 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0633 62 407 Calmodulin-binding Proteins AT5G65930 33.609 1.35e-43 170
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0633 K10396 - vvi:100266167 1555.04