Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0611 ATGAGAAAGATCAGGGGCTTCAAACTAGGAAAACGGGTCGTCAAGTTCTGCGGATGGTTTTTCCGGCGAAGCCGAAACCCATCTGGGTACCACCGTCTCGGGCAATCGACCGGCAAGACCAAGACCATTTCTCGACTCTGCAACTGGGGTCAACGTCTCAAAACCAAAGCCAAGAGGATATGTTCGTTGAACCCGGGTCCGGCTTGTTTCTCCGGTTACCTTCCGGTGGGTGAGGAGATGCCAGCGGCGACGGTTCCGAAAGGTCATCTGGCGGTGTACGTGGGTCAAAAAGACGGCGACTTCCAGCGAGTCCTTGTGCCGGTGATATACTTCAACCACCCATTGTTTGGTGAGTTGCTGAGAGAATCCGAGGAGGAGTATGGGTTTCAGCACCCAGGTGGCATCACCATACCTTGCCGGATATCGGAGTTCGAGAGCGTACAGACGAGGATCGCCGCCTGTCAGGGCTGCCGAAAAATGACGTGGAGGCGGCACTACTCAGCTGGTTGCCATTATTGA 519 0.5491 MRKIRGFKLGKRVVKFCGWFFRRSRNPSGYHRLGQSTGKTKTISRLCNWGQRLKTKAKRICSLNPGPACFSGYLPVGEEMPAATVPKGHLAVYVGQKDGDFQRVLVPVIYFNHPLFGELLRESEEEYGFQHPGGITIPCRISEFESVQTRIAACQGCRKMTWRRHYSAGCHY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0611 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 146 IPR003676 GO:0009733
Vvi15g0611 172 Pfam Auxin responsive protein 65 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0611 Vvi-Chr15 14643007 14643525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0611 81 144 Calmodulin-binding Proteins AT3G43120 48.438 6.25e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0611 K14488 - vvi:100260776 370.548