Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0585 ATGAAGGATATGCCCTTACCCTTGGAGTTAGAGGGGAAGGGGGTGTTTGAGATTTGTTTGAATTCTTTGCTGGAGAAGTGGAACAAAGAAGAGGAAGAAGGAGGTTGTTGTGTGGGCACTGAGCCTACCTCTGTCCTGGATACTAGAAGAAGCCCAAGTCCTCCTACATCCACCTCAACACTGTCTTCTTCTTGTGGTGGTGGTGGTTCAGATACGGCCGGCGTGGCGGCGGTTTCCGGAAACCCTTCTCAGAAATGGCCTCCGGCACAGCCGGACACCACAAGCTCCAATGCTGGAGTTGAACTCCACCCAATTCCCGCCTCTGTAGATCTCGGGGCCGGTGAAAAATGCGGTCTTGGAATGGAGGATTGGGAGAGTGTGTTGTCGGAGACGGCAGCCTCGCCCAGCCAAGAGCAGTCCATTCTCCGGTGGATCATGGGTGATGTCGAGGACCCATCAGTGGGCTTGAATAAACTGCTTCAATCTGGTGGAGGTGGCCCTCCTGATTTCGAATTCAGCAGTGGCTTTGGGGTTGTGGATCAGGGTTTTGGGTTTGAGCCATGTCTGGGTTCTGGGTCCTCCATGAATGCACCTTGTCCTGGTTTTCCTCCTACCAGCAACAGCGTCAATAGTATCAATCATGGGAGGATTGGTCCGGTTTCGAATCCGAACCAACCTAATTTCAAGATTCATAACCCTCAAAGCAACCCGAATTTTGCAAAATCGGGGAACAATCTTATGCCCATTTCGTTTAATCAGCAGCAACTGCAGCAGCAGCCGTTTGAAGCTTTGGATGAGAAGCCACAGATTTTAATTCCCCAGGTGCTTATAAACCAGCACCAGGCTCAACATACTCAAAACCCCGCTTTTTTCTTGCCATTGCCCTATGCCCAGCAAGAGCAGAACCTCCTCTTGCCGCCCCAGGCCAAGCGGCACAACACTGGGCCTATAGGGAGCATTGAACAGAATTGTCCGGTTCCAAAGGTTCCGTTTTCGGATTCAGGGCAGGAGCTGTTTGCTCGGCGACAGCAGCAGCAACAGCAGGCACAAGGGTTTCCTCAGCAGCTTCAGTTGCTTCCTCATCATCTTCAGCCAAGGCCGGCCATGGGAAGTAAGCCGAAAATGGTTGGGGAAGAAATGGGGCACCACCAGCAGTATCAACAGGTGATAATCGACCAGCTGTTCAAGGCCGCAGAGCTGGTCGAGACGGGGAATACAATACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTCCAATTGGCAAGCCTTTTCAAAGAGCTGCTTTCTACTTCAAGGAGGCCCTGCAATTACTCCTCCATTCCAACAGCAATAACACCAACCCGTTGGCCACCTCGCCTCATTCTTCACCATTTAGCCTTATCTTCAAGATTGGAGCTTACAAATCCTTCTCAGAGATATCACCGCTCATTCAATTTGCCAATTTCACCTGCATTCAAGCCATCCTTGAAGCCTTGGAGGGCTTTGATCGAATCCACATAATCGATTTTGATATTGGATATGGTGGGCAATGGGCTTCGCTTATGCAGGAGCTTGCCTTGAGGAACGGTGGTGCCCCTTCTCTGAAAATCACTGCGTTTGCTTCTCTCTCCAACCATGATCAGCTTGAGCTTGGCCTCGCCAGAGAAAATCTAAACCACTTTGCTGGTGAAATTAACATGGCTTTTGAACTTGAAATTCTAAGCCTTGATTCTTTGAATTCATTACCCCTTCATCTCTCAGAGAATGAAGCAGTTGCTGTGAACCTCCCAGTTGGTTCTTTCTCGAATTACCCCTTACCCCTTCCTTTGGTACTTCGTGTTGTGAAGCAGCTCTCCCCAAAAATTATGGTTTCATTGGACCGAGGCTGTGACCGAACTGATCTTCCATACTCTCACCATATCCTTCACGCCTTTCAGTCTTACTTGGCCCTTCTCGAGTCCCTTGATGCTGTAAATGTGAACTCAGATGCCCTGCAAAAGATTGAAAGGTTCTTGCTTCAACCTGGCATTGAGAAAATCGTCCTGGGTCGCCACCGCTCCCCTGAGAAGACCCCACCTTGGAGGGCTCTTCTATTATCATCTGGGTTCTCCCCATTAACGTTCAGTAATTTCTCAGAGTCCCAAGCTGAGTGTTTGGTGAAGCGGACGCCTGTTCGGGGTTTCCACGTTGAGAAGAGACAATCTTCGCTTGTTCTCTGCTGGCAAAGAAAAGATCTCATCTCAGCTTCAGCTTGGAGGTGCTGA 2253 0.4993 MKDMPLPLELEGKGVFEICLNSLLEKWNKEEEEGGCCVGTEPTSVLDTRRSPSPPTSTSTLSSSCGGGGSDTAGVAAVSGNPSQKWPPAQPDTTSSNAGVELHPIPASVDLGAGEKCGLGMEDWESVLSETAASPSQEQSILRWIMGDVEDPSVGLNKLLQSGGGGPPDFEFSSGFGVVDQGFGFEPCLGSGSSMNAPCPGFPPTSNSVNSINHGRIGPVSNPNQPNFKIHNPQSNPNFAKSGNNLMPISFNQQQLQQQPFEALDEKPQILIPQVLINQHQAQHTQNPAFFLPLPYAQQEQNLLLPPQAKRHNTGPIGSIEQNCPVPKVPFSDSGQELFARRQQQQQQAQGFPQQLQLLPHHLQPRPAMGSKPKMVGEEMGHHQQYQQVIIDQLFKAAELVETGNTILAQGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHSNSNNTNPLATSPHSSPFSLIFKIGAYKSFSEISPLIQFANFTCIQAILEALEGFDRIHIIDFDIGYGGQWASLMQELALRNGGAPSLKITAFASLSNHDQLELGLARENLNHFAGEINMAFELEILSLDSLNSLPLHLSENEAVAVNLPVGSFSNYPLPLPLVLRVVKQLSPKIMVSLDRGCDRTDLPYSHHILHAFQSYLALLESLDAVNVNSDALQKIERFLLQPGIEKIVLGRHRSPEKTPPWRALLLSSGFSPLTFSNFSESQAECLVKRTPVRGFHVEKRQSSLVLCWQRKDLISASAWRC* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0585 750 MobiDBLite consensus disorder prediction 29 100 - -
Vvi15g0585 750 ProSiteProfiles GRAS family profile. 381 749 IPR005202 -
Vvi15g0585 750 MobiDBLite consensus disorder prediction 76 100 - -
Vvi15g0585 750 Pfam GRAS domain family 391 749 IPR005202 -
Vvi15g0585 750 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 359 745 IPR005202 -
Vvi15g0585 750 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0585 Vvi-Chr15 14397074 14399326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0585 361 750 GRAS Transcription Factor Family AT4G00150 61.168 6.23e-153 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi15g0585 GRAS 5.4e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0585 - - vvi:100267664 1418.29