Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0450 ATGAGGGTTTTGGATACGAAGGAATTCGAATCAAGGAGACACCCCAGATTTTTGGGAGGCCAAAAAGTGGGTAAGCTCTGTGCCAGAGGAGGTTCTCAAGGGATGCCAATGAAAAGAGTAGAGGACTTGAGAAGAGAAAGAGATAACAATGAGAGGAAAAGGTCTAGGGTCTCACAGAAAGAGAGAACAAGGGAGCTTTTTGGCATGTCGATTGCATTTCTTTTCGTTCAAGAAACTGTTGAGGGGGTGGTTGCGGCAGTGAAAAGGCTCAAAGATGTGTCTATATCCGAAAAGGAATTTAGGGAGAAGGTCGAAACTGCAGGACCAATAGATCATGAGAATTTGGTCCCACTCAGGGCTAATTACTATAGCAAGGATGAGAAGCTTATTATATATGGTTATATGCCAATTGGAAGCCTGTCTGCACTTCCACATGGGAATAGAGGGGTTAGTATGACTCTACCAATTTGGGAAGCTAGGTCTGGCATTGCCCTTGGAGCCACCCGAGGGATTGCTTATATCCACTCATGGGGTTCCGCAAGTCCCCATGGAGACATTAAGTCATCAAATATCCTTCTCACTAAATCCTGTGAAGGCCAAGTTTCTGACTTTGGCCTTGCTCATCTAGTTGGGCCCATTGCCATTCCTAACCGTGTTGTTGGCTACTGTGCACTAGAGGCGACAGATGCTCGTAAAGTCTCTAAAAAAAAAGTCGATGCCTACAACTTTGGTGTATGGCTTTTAGAACTGCTTACATGA 759 0.4493 MRVLDTKEFESRRHPRFLGGQKVGKLCARGGSQGMPMKRVEDLRRERDNNERKRSRVSQKERTRELFGMSIAFLFVQETVEGVVAAVKRLKDVSISEKEFREKVETAGPIDHENLVPLRANYYSKDEKLIIYGYMPIGSLSALPHGNRGVSMTLPIWEARSGIALGATRGIAYIHSWGSASPHGDIKSSNILLTKSCEGQVSDFGLAHLVGPIAIPNRVVGYCALEATDARKVSKKKVDAYNFGVWLLELLT* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0450 252 PANTHER OS05G0588300 PROTEIN 81 252 - -
Vvi15g0450 252 Gene3D Transferase(Phosphotransferase) domain 1 136 252 - -
Vvi15g0450 252 Gene3D Phosphorylase Kinase; domain 1 71 134 - -
Vvi15g0450 252 Coils Coil 40 63 - -
Vvi15g0450 252 Pfam Protein kinase domain 82 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0450 252 ProSiteProfiles Protein kinase domain profile. 60 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0450 252 SUPERFAMILY Protein kinase-like (PK-like) 81 252 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0450 Vvi-Chr15 12240206 12241350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0450 83 252 Receptor kinase-like Gene Family AT1G48480 61.404 7.25e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vvi15g0450 Pkinase 5.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0450 - - vvi:100242681 385.571