Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0432 ATGTTGGAGAAAAAGAAATTACCTCATTTTGAATCTTTTGTCATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACAGGGCGCAGAGAAAGGATAATGGAAAACAAGTTGCTCTTAAATGTCCTCATGCTAATGCTCAAACACATTATGTTTATAATGAGCTAAAAATGCTTGAACGGTTTGGGGGTAGGAACTTCATAATAAAGTATGAAGGCTCTTTCAAAGGCAAGACTGGTGATTGCTTTGTTCTGGAGCATGTTGAGCATGACAGGCCTGAGGTTTTAAAGAGAGAAATAGATGTATTTCAGCTTCAGTGGTATGGATATTGCATGTTTAAAGCCCTTGCATACCTACACAGGCAGGGAGTAGTACATAGAGATGTGAAGCCTGGCAACTTCCTTTTCTCTCGGAAGCTGAACAAAGGTTACCTCATTGATTTTAATCTAGCCCTGGATTTGCAGCGAAAGTATGCCAGTGGAAGTAAATCAAAATCAAGCTTTGATCATGTTCCTCTACCCCTCTCAAAATCTTCTCCATCAACCAAAGATAAGAAGTTCATGAGGGGTAAATTTGAAGGAATTGTAGGCTCCAAGGCAACTCTTGAACCTAACAACATGAAGAAGATGGCTAATGCTGATCCATTAAAGACTCATCCTGACCTTGGTGGTAGGAACATATTTAGAAGCCAAGGTGCAGATGGCTCAGGTATTACCTCCACGAAGGATGTGACAAGTACTAGGACTCCTTCTGCAGAAAGGCTGAGGGAGCCCCTACCATCTTTGGGAAGGAAGGAGCTGATTAGCCTGGCACAGCATGCAATGCAAGGTCCAAATCAAGATGCCATAAATATTCCTGCTAGTCAAAGGAAAAGGGTTGCTGCTCCAGGCAAGGTGGACGAAAAAATTGTTTATCTGAGTCCAATGCCCCTGCACTCTATGGGTGTTGCTGTCACTGGTGCTGGTTTAATGAGAAGCAAAGGGGATGGAAAACATAAAAAGGAAGGTCCTTGTGTTGGAACCAAGGGTTTCCGGGCTCCAGAGGTTTTGTTCAGATCTCTACATCAAGGCTCCAAGGTTGATATCTGGTCAGCTGGGGTTACTCTACTTTATCTAATGGTTGGAAGATCCCCATTTGTTGGAGATCCTAAACAGAATATAAAGGACATTATGAAGTTGAGGGGAAGTGAAGATCTATGGGAGGTGGCCAAGCTACACAATCGGGAATCGTCATTTCCAGTGGAATTGTTTGACATACAGTTCTTGCCATCGGTGGAATTAAAGCACTGGTGTAAGCTTAACACAAAAAGGCCAGAGTTCTTCAAACTCATACCAAGATCACTCTTTGATCTTGTGGATAAGTGCTTGACAGTAAATCCAAGACTAAGGATTAGTGCGGAGGAAGCTCTTAGGCATGAATTCTTTGCCCCATGCCATGAGAGCCTCAAGAAACAGAGGATGCTTAGACAGGGGCTGAGGTTGGAGTCGGGAGAATATCGAAGTGGCCATCTTGAACATGCAAATAGTCAAGTCTCATTAGACCTATGA 1551 0.4307 MLEKKKLPHFESFVIEEEEGSGGYGTVYRAQRKDNGKQVALKCPHANAQTHYVYNELKMLERFGGRNFIIKYEGSFKGKTGDCFVLEHVEHDRPEVLKREIDVFQLQWYGYCMFKALAYLHRQGVVHRDVKPGNFLFSRKLNKGYLIDFNLALDLQRKYASGSKSKSSFDHVPLPLSKSSPSTKDKKFMRGKFEGIVGSKATLEPNNMKKMANADPLKTHPDLGGRNIFRSQGADGSGITSTKDVTSTRTPSAERLREPLPSLGRKELISLAQHAMQGPNQDAINIPASQRKRVAAPGKVDEKIVYLSPMPLHSMGVAVTGAGLMRSKGDGKHKKEGPCVGTKGFRAPEVLFRSLHQGSKVDIWSAGVTLLYLMVGRSPFVGDPKQNIKDIMKLRGSEDLWEVAKLHNRESSFPVELFDIQFLPSVELKHWCKLNTKRPEFFKLIPRSLFDLVDKCLTVNPRLRISAEEALRHEFFAPCHESLKKQRMLRQGLRLESGEYRSGHLEHANSQVSLDL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0432 516 Pfam Protein kinase domain 339 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0432 516 Pfam Protein kinase domain 16 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0432 516 MobiDBLite consensus disorder prediction 229 255 - -
Vvi15g0432 516 MobiDBLite consensus disorder prediction 163 186 - -
Vvi15g0432 516 Gene3D Transferase(Phosphotransferase) domain 1 2 172 - -
Vvi15g0432 516 ProSiteProfiles Protein kinase domain profile. 13 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0432 516 Gene3D Transferase(Phosphotransferase) domain 1 304 501 - -
Vvi15g0432 516 FunFam Kinase like protein 317 487 - -
Vvi15g0432 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Vvi15g0432 516 MobiDBLite consensus disorder prediction 163 182 - -
Vvi15g0432 516 FunFam Probable serine/threonine-protein kinase DDB_G0291918 5 172 - -
Vvi15g0432 516 SMART serkin_6 13 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g0432 516 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 13 485 - -
Vvi15g0432 516 MobiDBLite consensus disorder prediction 233 253 - -
Vvi15g0432 516 SUPERFAMILY Protein kinase-like (PK-like) 10 485 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0432 Vvi-Chr15 11651287 11665356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0432 13 155 MAP Kinase Kinase Kinase AT3G13530 31.677 1.57e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Vvi15g0432 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0432 K02214 - vvi:100261519 1037.71