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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vvi15g0418
ATGGCCAGTACGACGTCGCCCGCGCAGGACGCATCTCTGCCTCCGCCCCAGCAACAGCCCTCTCCCGCGCCACCCTCCTCCCGGCGGCTCCCACCGCCGTGCTGGTCCCACGACGAGACCGTGGCTTTGATCGATTCGTATCGGGACAAGTGGTACGCCCTCCGCCGTGGGAATCTCAGGGCCAACCACTGGCAGGAGGTCGCCGACGCCGTCTCGCGGCGGTGCCCGCTCTCCAGTCCGCCCAAGACTTCCGTACAGTGCCGCCACAAGATGGAGAAGCTCCGGAAACGCTACCGGACGGAGTTGCAGCGGTCGATGAACGCGCCGAGTCACCGGTTCAACTCGTCTTGGGTTCACTTCAAGAGGATGGATGCCATGGAGAAGGGGCCGTCCTCCACCGCCGCCGTCGAATCGGGCTCTGATGGTGACGACGATGACGACGACGATGATCAGGATTTGTATGAAGATGGTGGTCTCAAACGTGGCATTGGTAATACTCGGAGCCTCCAGGGTTTGATGAGTAACGGAATCGGCAGTGGCGGCGGACCCGGTGCCGGGTTTCGAATTCGAATCCCTGGTCGCGGGAATTTGGACTCGCCGCCTATGGCGAAGATTTATGGAAATTTTGATCAAAACCCTAACCCTAGCCCTAATTTTGGGTCCAGGGTTTTGGGGGATAACGATCGGGCGAGGCCAGCCATGGGCAAGAGAAGCGGTGGTGGTGGTGGAGACCCGGTGGCTGAGATGGTGGCAGCGATAAAGATGTTAGGAGATGGGTTTGCGAAAATGGAGCAGAAGAAGATGGACATGGCCCGGGAGGTCGAGGCAATGCGCATGGACATGGAGATGAAGCGGACGGAGATGATTCTGGAGTCCCAACAGCGGATTGTGGAGGCATTTGCCAATGCATTATCAGAGAAGAAGAAGAAGCCTAAGAAAATGACCTCATCGCCGGAGTATTAG
963
0.5867
MASTTSPAQDASLPPPQQQPSPAPPSSRRLPPPCWSHDETVALIDSYRDKWYALRRGNLRANHWQEVADAVSRRCPLSSPPKTSVQCRHKMEKLRKRYRTELQRSMNAPSHRFNSSWVHFKRMDAMEKGPSSTAAVESGSDGDDDDDDDDQDLYEDGGLKRGIGNTRSLQGLMSNGIGSGGGPGAGFRIRIPGRGNLDSPPMAKIYGNFDQNPNPSPNFGSRVLGDNDRARPAMGKRSGGGGGDPVAEMVAAIKMLGDGFAKMEQKKMDMAREVEAMRMDMEMKRTEMILESQQRIVEAFANALSEKKKKPKKMTSSPEY*
321
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vvi15g0418
320
Pfam
Myb/SANT-like DNA-binding domain
33
126
IPR044822
-
Vvi15g0418
320
SMART
118neu2
42
131
IPR006578
-
Vvi15g0418
320
MobiDBLite
consensus disorder prediction
128
196
-
-
Vvi15g0418
320
MobiDBLite
consensus disorder prediction
210
245
-
-
Vvi15g0418
320
FunFam
Trihelix transcription factor ASIL2
35
100
-
-
Vvi15g0418
320
MobiDBLite
consensus disorder prediction
139
153
-
-
Vvi15g0418
320
MobiDBLite
consensus disorder prediction
1
34
-
-
Vvi15g0418
320
PANTHER
TRIHELIX TRANSCRIPTION FACTOR ASIL2
19
306
IPR044823
-
Vvi15g0418
320
Gene3D
-
35
100
-
-
Vvi15g0418
320
MobiDBLite
consensus disorder prediction
13
31
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vvi15g0418
Vvi-Chr15
11288753
11289715
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vvi15g0418
34
136
Trihelix Transcription Factor Family
AT3G14180
36.449
1.84e-18
83.6
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Trihelix
Vvi15g0418
Myb_DNA-bind_4
8.3e-22
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vvi15g0418
-
-
vvi:100263384
541.191
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