Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0409 ATGGTGAGCCTAATGGTGGATTCTACAACCTCCATGCTAAGCTCTTGGGAAAGCCTAATTGATGGGAGAGGAGTTGCGGATATTCGGGTTGATGATGATTTAAGAAGCTTGTCTGCAGATATAATCTCAAGAGCTTGTTTTGGAAGCAATTATTCCAAAGGACGACAAATATTTTCAAAGATTAGAACTCTTCAAGTGATCTTGTCCAAGGGAGGTTTACACATCGGCCTTCCTGGCTTAATTTACATACCAACCAAAAGCAACAGAGAGATATGGAGACTGGAGAAGGAGATCGATTCCATGATATTGAAGGTAGTGAAAGAACGCATTGAGACCACACAAGAGAAGGATCTTCTGCAGATGATTCTTGATGCTGCTAAAACTTATGGGGATGAAGATAAATTATCGACAAACGTGGCTGCAGACAGGTTCATAATAGATAACTGCAAGACAATATACTTTGCGGGCCATGAGACCACTGCCACAGCTGCTTCAATGGCCTTGGTGCTGTTGGCTGCATATCTGGACTGGCAAGCTCGCGCTCGTGCTGAGGTGCTTGAAACTTGCAGTGATGGAGTTCCAGATGCTGATATGCTTCGCAGAATGAAAATGTTAACCATGGTGGTTCAAGAGACGTTGCGCCTTTATCCACCAGGTACATTTGTGGTAAGAGAAGCTCTACAAGATATGAAGATTAGAGACCTTGTAATTCCCAGAGGTGTAAGCTTTTGGGTCCCAATACCGGTGCTGCATCAGGATCCAGAGCTATGGGGGCCTGACGCACATCAGTTCAATCCCGAGAGGTTCAGCCATGGAACGGCTGGAGCTTGCAAGAACCCGCAGGCTTACATGCCATTCGGAGTAGGGCCTCGTGTCTGTGTTGGCCAGCACTTGGCCATGATAGAACTGAAGCTGATTTCTGAATGGATTCTTCAAATTGCATCTTTTTCATAA 954 0.4528 MVSLMVDSTTSMLSSWESLIDGRGVADIRVDDDLRSLSADIISRACFGSNYSKGRQIFSKIRTLQVILSKGGLHIGLPGLIYIPTKSNREIWRLEKEIDSMILKVVKERIETTQEKDLLQMILDAAKTYGDEDKLSTNVAADRFIIDNCKTIYFAGHETTATAASMALVLLAAYLDWQARARAEVLETCSDGVPDADMLRRMKMLTMVVQETLRLYPPGTFVVREALQDMKIRDLVIPRGVSFWVPIPVLHQDPELWGPDAHQFNPERFSHGTAGACKNPQAYMPFGVGPRVCVGQHLAMIELKLISEWILQIASFS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0409 317 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 316 - -
Vvi15g0409 317 SUPERFAMILY Cytochrome P450 1 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 286 295 IPR017972 GO:0005506|GO:0016705
Vvi15g0409 317 Pfam Cytochrome P450 1 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 Gene3D Cytochrome P450 1 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS E-class P450 group I signature 144 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS E-class P450 group I signature 164 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS E-class P450 group I signature 37 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS E-class P450 group I signature 293 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS E-class P450 group I signature 283 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS P450 superfamily signature 284 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS P450 superfamily signature 207 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS P450 superfamily signature 155 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0409 317 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0409 Vvi-Chr15 11136033 11137148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0409 1 317 Cytochrome P450 AT5G24900 46.933 6.04e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0409 K24544 - zju:107421371 418.313