Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0408 ATGAAGAAGATCCAACTCCACGCACACTCAACTGCTGCAAAAGATCATGACTCTATTGCTCATGACTGGCCTTTCACACTCTTCTCTTATATTCATCAGTGGAGAAATCAATATGGACCAATATTCACATATTCAACTGGAAACGTACAACTACTGTGCATAACGGATCCAGAGATGGTGAAATACATAAGCCTTTGCACTTCTCTGAGTCTAGGAAGGCCTTCTTTTGCATCTAAGGATCGCAGGCCTCTGTTTGGTGAAGGCATTTTATCATCTAATGGTTCAGTTTGGGCCTACCAAAAGAAAATCATTGCTCCTGAGTTGTACATGGACAAGGTTAAGGGAATGGTGAATTCAATGGTGGATTCTACTACCATAGTGCTCAGAACTTGGGAGAATAGTGTAGACAATGAGGAAGGAGTCGCAGATATTAGAGTTGATGAGGATTTGAGAAGGGTGTCCGCAGATATAATCTCAAGAGCTTGCTTTGGAAGCAGCTATTCCCAAGGAAAAGACATATTCTTAAAGCTCCGAACTCTTCAAAAGATCATGTCCAAGGGGTTTTCATACACTGGGGTTCCTGGGTGGAGACACTTGCCAAACAAAAACAATAGAGAGATATGGAGATTAGAGAAGGAGATAAACATGATGATATTGAAGGTGGTAAATGAACGCATTGGGGCTCAACACGGCGAAAAGGACCTTTTGCAAATGATACTCGAGGCTGCCAAAAGTTCATCTAGTCACAATGGTAAACCTTCAATGGATATCAACTCAGACAAGTTCATAGTCGATAATTGTAAGAACATATACTTTGCTGGCAATGAGACCACTGCCGTAACCGCGTCATGGGCCTTAGTGCTGTTAGCTACGCATCCAGACTGGCAAGCTCGTGCTCGTGCTGAGGTGCTTGAAATTTGCAAGGGTCGCCTTCCAGATGCTGATATGCTGCGACGCATGAAAACGTTGGCTATGGTGATTCAAGAGACATTGCGCCTTTATCCTGTGGTGGCATTCGTAGCAAGAGAGACCTTTCAAGACATGAAGTTTAGAGACCTTTCAGTTCCGAGAAATTCAGTGATTTGGATTCCACACTACTACAAAAATAATTTATGA 1116 0.4274 MKKIQLHAHSTAAKDHDSIAHDWPFTLFSYIHQWRNQYGPIFTYSTGNVQLLCITDPEMVKYISLCTSLSLGRPSFASKDRRPLFGEGILSSNGSVWAYQKKIIAPELYMDKVKGMVNSMVDSTTIVLRTWENSVDNEEGVADIRVDEDLRRVSADIISRACFGSSYSQGKDIFLKLRTLQKIMSKGFSYTGVPGWRHLPNKNNREIWRLEKEINMMILKVVNERIGAQHGEKDLLQMILEAAKSSSSHNGKPSMDINSDKFIVDNCKNIYFAGNETTAVTASWALVLLATHPDWQARARAEVLEICKGRLPDADMLRRMKTLAMVIQETLRLYPVVAFVARETFQDMKFRDLSVPRNSVIWIPHYYKNNL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0408 371 Gene3D Cytochrome P450 17 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 Pfam Cytochrome P450 27 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 SUPERFAMILY Cytochrome P450 24 367 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 365 - -
Vvi15g0408 371 PRINTS E-class P450 group I signature 153 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS E-class P450 group I signature 35 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0408 371 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0408 Vvi-Chr15 11118691 11122882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0408 1 331 Cytochrome P450 AT5G24910 45.588 2.43e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0408 K24544 - vvi:100249636 753.436