Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0407 ATGGTGGTGTCAGTAGTGTTGGGTGGTGTTCTAGGGTTGATTGTGTATCTGTACGGTGTTTTGGTGTTGCACCCAAGGAGGCTTCAATCAAAGCTTAGAAGGCAAGGGATTAGAGGGCCTTCACCTTCACTTCTGATTGGGAATATAGCTGAGATGAAGAAGATCCAACTCCAGGCACCTCCAAGTACTGCTACAGAGCACCATCTTCCTCTTTCCCATGACTGGCCTTCCACTGTCTTTCCATATATCCGGCAATGGAGAATTAAATATGGACCAACATTCACATATTCAACTGGAAATGCACAGCTACTATGCATAACAGATCCAGAGATGGTGAAACACATAAGCCTCTGCACTTCTCTGAGTCTAGGAAAACCTTCTTTTTTAGCAAAGGAGCGCAAGGCTCTGTTTGGGAGTGGCATTCTGACATCAAGTGGTGCAAATTGGGCTTACCAGAAGAAGATCATTGCTCCTGAGTTGTACATGGACAAGGTTAAGGGAATGGTGAAGTTAATGGTGGATTCTACCACCTCATTGCTAAGATCTTGGGAGAGTAGAATTGAAAAAGAGGAAGGGTTTGCAGATATTAGAGTTGATGAGGACTTGAGAAGTTTATCTGCAGATATAATCTCAAGAGCTTGCTTTGGAAGCAGTTATTCCCAAGGGAAAGACATATTCGTAAAGCTTCGAACTCTTCAAACGGTCATGTCCGATGGATTCCTCCATTTTGGGGTTCTTGGCATTAGTCACTTGCCAAGCAAAAGTAATAGACTGAAATGGAGGTTGGAGAAAGAGATCGACACGATGATAATCAACGTGGTAAAAGAACGAATTGGGGCTCAACACGGTGAGAAGGACCTTTTGCAAATGATACTTGAGGCTACCAAGAATGCTTATGCTGAGTATGATAGACCCTTTGTGAATATGAGTTCGGACAAGTTCATAGTAGACAATTGCAAGAACATATACTTTGCTGGCCACGAGACCACTGCCACGACCGCTACATGGGCCTTAATATTACTAGCTGCAAATCCAGATTGGCAAGCACGCGCTCGTGCTGAGGTGCTTGAAATTTGTAAGGATGGCACCGCCCTCCCTGATGCTGAGATGCTTCGAAACATGAAAATATTAACTATGGTGATTCAGGAGACATTGCGACTTTATCCGGTGTCATCATTTGTGGCAAGAGAAGCCTTTGAAGATGTGAAGTTCAAAGACCTTTTAGTTCCAAAAAATACAATAATTTGGATTCCAGTTCCGACACTGCACCAGAATCCTGATGTATGGGGGGCTGATGTGAACCTGTTCAATCCAGAAAGGTTTGCCAATGGAATCCAAGGGGCATGTAAAATTCCTCAGGCTTATATGCCATTTGGAATGGGGATGCGCATCTGTGTTGGCCAGCACTTTGCCATGGTAGAACTGAAGGTGGTTTTGTCCCTCATTCTATCAAAGTTTTGCTTCTCGCTCTCACCAGCATATCAACACTCCCCCATGTTTAGGTTAGTTATTGAACCAGAAAATGGAGCTAGCCTCCTTATGAGGAAAGTGTGA 1554 0.4395 MVVSVVLGGVLGLIVYLYGVLVLHPRRLQSKLRRQGIRGPSPSLLIGNIAEMKKIQLQAPPSTATEHHLPLSHDWPSTVFPYIRQWRIKYGPTFTYSTGNAQLLCITDPEMVKHISLCTSLSLGKPSFLAKERKALFGSGILTSSGANWAYQKKIIAPELYMDKVKGMVKLMVDSTTSLLRSWESRIEKEEGFADIRVDEDLRSLSADIISRACFGSSYSQGKDIFVKLRTLQTVMSDGFLHFGVLGISHLPSKSNRLKWRLEKEIDTMIINVVKERIGAQHGEKDLLQMILEATKNAYAEYDRPFVNMSSDKFIVDNCKNIYFAGHETTATTATWALILLAANPDWQARARAEVLEICKDGTALPDAEMLRNMKILTMVIQETLRLYPVSSFVAREAFEDVKFKDLLVPKNTIIWIPVPTLHQNPDVWGADVNLFNPERFANGIQGACKIPQAYMPFGMGMRICVGQHFAMVELKVVLSLILSKFCFSLSPAYQHSPMFRLVIEPENGASLLMRKV* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0407 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 Gene3D Cytochrome P450 23 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vvi15g0407 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 509 - -
Vvi15g0407 517 Pfam Cytochrome P450 81 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0407 517 SUPERFAMILY Cytochrome P450 67 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0407 Vvi-Chr15 11091551 11095999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0407 111 509 Cytochrome P450 AT5G24900 47.549 3.40e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0407 K24544 - vvi:100265053 1003.05