Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0403 ATGCCCTACTTTTCACAGAAAAGAGTATTTAATGTTTGCTTTAATCAAGTGCCTTCTCATCACCACCTCATTCACCACAAACATTCTATATATATATGGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGAAGAGGAAATGGAAGAAGGGCAAGTTTTAACAGAAAAGATGATAGTATCAGTGGTGTTGGGTGGCGTTGTAGGGTTGTTCATATATCTCTATAATACTTTGATTTTGAAGCCAAAAAGGCTTCAATTAAGGCTTGGAAAGCAAGGGATAAGAGGCCCTTCACCTTCATTTCTAGTTGGAAATATTCCTCAAATCAAGAGGATACAAACCCAGAAAGCCCACTCAACAACTCCAAAACATGTTCCGATTGCTCATGACTGGTATTGCACTCTCTTCCCATATATTGAACAGTGGAGAAATCAATACGGAGCAATGTTCACATATTCATCTGGAAACACACAACTACTTTGCATAACGGATCCAGAGATGGTGAAGCAAATAAGCCTATGCACATCTTTGAAGCTAGGAAAGCCTGCTTATATGTTGAAGGAGAGGAAGCCTATGTTTGGGGAGGGCATCATCTCATCAAGTGGTCATATTTGGGCTTACCAAAAGAAAATCATTGCTCCTGAGCTATATTTGGACAAGGTTAAGGGCATGGTGGACTTAATGGTGGTTTCCACAAGCTCAATGCTAAGATCCTGGGAGAGTCGAATCGACAAAGAGGGAGGAATTGCAGAGATTAAAGTTGACGAGTACTTGAGAAACTCAACTGCGGATGTAATCTCAAGAGCTTGTTTCGGAAGCAGTTATGACCAAGGAAAGGACATTTTCTTAAAGCTTAGAACTCTTCAACAGGTCATGTCCAAGGCATTTCTATATTTTGGTGTTCCTGGCTTCAGACATTTGCCCACCAAAACTAATAGAGAGACATGGAGACTAGAGAAAGAGATCGTTTCAATGATATTAAGGGTAGTGAAGCAGCGAATTAGGGCTGCAGAAGAGAAGGACCTTATGCAAATGATACTCAAGGGCGCCAAGACTGGTGATGGTGAGTATGACGGTGCGTCATTGGGCATGAGTCCTGAGAAGTTTATGGTCGATAATTGCAAGAACATATACTTTGCTGGCCATGAAACCACTGCAACAACCGCCGCATGGGCCTTAATGCTCTTAGCCACACATCCAGAATGGCAAACTCGCGCCCGCAACGAGGTGCTTGAAATTTGCAAGGATGGCGCCCTCCCTGATGCTGATATGCTCCGAAGCATGAAAACATTGACTATGGTGATTCAAGAGACATTGAGGCTATATCCGGTGGGAGCATTTGTGGCAAGACAAGGGTCAGAAGACATGAAGTTCAAAGACATCATAGTTCCAAAGAACGTAGTAATTTGGATCCCAGTTCCATTCCTACACCAGAACCCTGATGTCTGGGGGCCGGACGCCCACCTGTTCAACCCAGAAAGGTTTGCCAATGGAATCCTGGGGGCTTGCAAGATACCGCAGGCGTATATGCACTTCGGGATGGGGATTCGCACTTGCGTCGGCCAGCAATTCGCCATGGTGGAGTTGAAGGTGATCTTGTCCCTCATTCTCTCCAAGTTTAGCTTCACTCTCTCGCCTGCATACCGACATTCTCCTGCGTTTAAGTTGACCATTGAACCACAACATGGGGTTAATCTCATTGTAAGGAAACTGTGA 1746 0.4416 MPYFSQKRVFNVCFNQVPSHHHLIHHKHSIYIWREGEREREREEEEEEEEEEESEEEMEEGQVLTEKMIVSVVLGGVVGLFIYLYNTLILKPKRLQLRLGKQGIRGPSPSFLVGNIPQIKRIQTQKAHSTTPKHVPIAHDWYCTLFPYIEQWRNQYGAMFTYSSGNTQLLCITDPEMVKQISLCTSLKLGKPAYMLKERKPMFGEGIISSSGHIWAYQKKIIAPELYLDKVKGMVDLMVVSTSSMLRSWESRIDKEGGIAEIKVDEYLRNSTADVISRACFGSSYDQGKDIFLKLRTLQQVMSKAFLYFGVPGFRHLPTKTNRETWRLEKEIVSMILRVVKQRIRAAEEKDLMQMILKGAKTGDGEYDGASLGMSPEKFMVDNCKNIYFAGHETTATTAAWALMLLATHPEWQTRARNEVLEICKDGALPDADMLRSMKTLTMVIQETLRLYPVGAFVARQGSEDMKFKDIIVPKNVVIWIPVPFLHQNPDVWGPDAHLFNPERFANGILGACKIPQAYMHFGMGIRTCVGQQFAMVELKVILSLILSKFSFTLSPAYRHSPAFKLTIEPQHGVNLIVRKL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0403 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Vvi15g0403 581 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS P450 superfamily signature 390 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 Pfam Cytochrome P450 148 557 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 153 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 379 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 399 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 PRINTS E-class P450 group I signature 271 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 MobiDBLite consensus disorder prediction 41 60 - -
Vvi15g0403 581 PANTHER CYTOCHROME P450 FAMILY MEMBER 86 573 - -
Vvi15g0403 581 SUPERFAMILY Cytochrome P450 139 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 Coils Coil 33 64 - -
Vvi15g0403 581 Gene3D Cytochrome P450 93 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0403 581 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0403 Vvi-Chr15 11039566 11043505 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0403 177 574 Cytochrome P450 AT5G24900 48.284 1.58e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0403 K24544 - vvi:100261547 1109.36