Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g0397 | ATGAAGTGTTTCTACTACTTTAAAGATAAGACCCGATTGAAGGTACAAAGATCAGCGCCGGAGTTGAAAAACCAAAGCAAATCATACTACTCGGGGTCTGATCTGGTCATTAAATCTTCGTGTTCAACTACTTCACGGCGCAGTATACCAGAATTATATGAAGAGAAGGCTCAAAACTTGCGAGTCTTCTCTTTTTCCGAGCTTAGACATGCCACACATGATTTCAGTAGGATGCTAAAGCTTGGGGAAGGTGGATTTGGTTGTGTGTATAAAGGTTCAATCAAGCCTGCTGATGGAAAGGGAGACTCCTTTGAGGTTGCCATTAAAAGGCTGAACCCAGATGGTGTTCAGGGTCATAAACAATGGGTGGCAGAAGTTCAATTTCTCGGTATTGTGGAGCACCCAAATCTTGTCAAGCTTATAGGATACTGTGCTGTAGATGGAGAGAGAGGAATTCAACGGCTACTTGTATATGAGTACATGCCAAACAAAAGCTTGGAAGATCACCTCTTCAATAAAGCTATCCCAGCTCTTCCTTGGCAGACAAGATTACAGACAGTACTTGGAGCAGCTCAAGGATTAGCTTATTTGCATGAAGAATTGGAAGTTCAGGTGATATATCGAGATTTTAAATCATCAAATGTGCTACTGGACAAGGATTTTAACCCAAAGCTTTCTGACTTTGGGCTTGCTAGGGAGGGGCCAGCAGATGGGTTTACTCATGTTTCAACAGCAGCGGTAGGAACTTTTGGGTATGCTGCTCCAGATTATATTGAGACAGGCCACCTGACAACTAAGAGTGATGTGTGGAGTTTTGGTGTTGTACTGTATGAGATCCTGACAGGCAGGCGATCGATGGAGAGAAACCACCCAAGAGCAGAGCAAAAGCTTTTGGAATGGGTGAAACATTTCCCTGCTAATAGTAAGAAATTTCACATGATAATGGACTGGCGCCTGGAAAACCAGTATCCTATCAGTACAGCTCGAAAAATTGCCAAGTTGGCCGACAGTTGTTTGTCGAAGAGTGCAAAAGACCGGCCAAAGATGAGTGAAGTTGTAGAGACTTTGAAGCAAATAATCCAACTCCCTGATGAAGGCGGCCCAAGTGAGAAAAGCCCTGAATCTTTCGACAACGATTCAGATGACAAAGATAAGAAGGCAGATCAACCAGGGCCTTCTGACTCCTGGAAAAGGCGGATGGCCCATCTAGCAAGCCTGGGTGAACATGTAGAAGGGTCCAACAGGAAAAGGTTTATGATCATGCAAAGGGCCAAAGTTCCTTGA | 1284 | 0.4408 | MKCFYYFKDKTRLKVQRSAPELKNQSKSYYSGSDLVIKSSCSTTSRRSIPELYEEKAQNLRVFSFSELRHATHDFSRMLKLGEGGFGCVYKGSIKPADGKGDSFEVAIKRLNPDGVQGHKQWVAEVQFLGIVEHPNLVKLIGYCAVDGERGIQRLLVYEYMPNKSLEDHLFNKAIPALPWQTRLQTVLGAAQGLAYLHEELEVQVIYRDFKSSNVLLDKDFNPKLSDFGLAREGPADGFTHVSTAAVGTFGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSMERNHPRAEQKLLEWVKHFPANSKKFHMIMDWRLENQYPISTARKIAKLADSCLSKSAKDRPKMSEVVETLKQIIQLPDEGGPSEKSPESFDNDSDDKDKKADQPGPSDSWKRRMAHLASLGEHVEGSNRKRFMIMQRAKVP* | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g0397 | 427 | ProSiteProfiles | Protein kinase domain profile. | 75 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi15g0397 | 427 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 161 | 367 | - | - | |
Vvi15g0397 | 427 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 160 | - | - | |
Vvi15g0397 | 427 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi15g0397 | 427 | MobiDBLite | consensus disorder prediction | 360 | 427 | - | - | |
Vvi15g0397 | 427 | FunFam | Serine/threonine-protein kinase BIK1 | 41 | 160 | - | - | |
Vvi15g0397 | 427 | CDD | STKc_IRAK | 81 | 359 | - | - | |
Vvi15g0397 | 427 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 374 | - | - | |
Vvi15g0397 | 427 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 109 | IPR017441 | GO:0005524 | |
Vvi15g0397 | 427 | Pfam | Protein tyrosine and serine/threonine kinase | 80 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi15g0397 | 427 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 356 | IPR011009 | - | |
Vvi15g0397 | 427 | MobiDBLite | consensus disorder prediction | 370 | 418 | - | - | |
Vvi15g0397 | 427 | PANTHER | OS01G0588500 PROTEIN-RELATED | 39 | 359 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi15g0397 | Vvi-Chr15 | 10890835 | 10897345 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi15g0397 | 1 | 364 | Glycoside Hydrolase | AT3G07070 | 40.789 | 3.61e-88 | 272 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vvi15g0397 | PK_Tyr_Ser-Thr | 2.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g0397 | - | - | vvi:100254696 | 860.522 |