Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0387 ATGCAAACATGGCTGCATCATGCCCATCTTCCACCTTACCACCTCATCACTCATATTTCCCATCCACTTTCCCCACATGCTCATCCCTATCTCACCCACACACCTTCCCTTCTTCAATGGGTGGAAATTCAGCCTGCGCCTCCCGCGAGCTCCTCCGCCGCCAGCACGCCAAGGACTGCATCTTCACCCCCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATGGTTCTTCTCATTCTTCTTTCCCTTGCTTCACTCTTCTCTTTTCTCACCTTGGTTCATGCTTGAATCCTCGGCGTTTATGCCAATGGTGCCACTCCAACAGCCCCCTCCATCTTCGTCACTGCCACCAACTTATGCCCACCTGACTACACTCTTCCTAGCGACAATGGCGGCTGGTGCAACTCTCCTTATCCCCACTTCAACCTTGCTATGCCTGTGCTTCTCAAGATCGCTTGGTACCGGGCCGGAATTGTCCCCGTTGCTCTCCATCGGGTACCCTGCTGGAAGAGTGGCTACTTGTAGAGCTGGTTCAACTATCCCGCTGTCCACTGATCACAAACCTGACAGATATGATGAACGTCAAGGGATTGAAGATGCTGGAGTTTCATTATTTGGGCAGGAACTTGGCGGGTTGGTGGTGTTCTTGCTATTTCTCGTGCATTTGGGGATAAACTTCTTAAGGCATATGTTGTTGCCAATCCAAAAATTCAAGAAGAAGAAATTGATGGTGTAG 744 0.504 MQTWLHHAHLPPYHLITHISHPLSPHAHPYLTHTPSLLQWVEIQPAPPASSSAASTPRTASSPPYSLSLSLSLSLSQWFFSFFFPLLHSSLFSPWFMLESSAFMPMVPLQQPPPSSSLPPTYAHLTTLFLATMAAGATLLIPTSTLLCLCFSRSLGTGPELSPLLSIGYPAGRVATCRAGSTIPLSTDHKPDRYDERQGIEDAGVSLFGQELGGLVVFLLFLVHLGINFLRHMLLPIQKFKKKKLMV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0387 247 SUPERFAMILY PP2C-like 173 209 IPR036457 -
Vvi15g0387 247 Gene3D - 172 218 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0387 Vvi-Chr15 10707192 10711942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0387 173 204 PP2C-type Phosphatase Gene Family AT1G43900 71.875 4.68e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0387 K17506 - vvi:104879041 141.739