Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g0344 ATGGGGTTGGCGAGCAGTTGGGTGCTGTATACAGCAATATTTGCTGGTGCTTTGGCTTTGAGATGGGTTTTGCTGAGAGTAAATAAGTGGGTGTATGAAGGGAGATTGAAGGGGAAGAGTTATCATCTTCCTCCTGGTGATCTTGGTTGGCCTCTCATTGGGAATATGTGGACTTTTCTCAGAGCTTTTAAGACAAAAAATCCTGATTCTTTTATCTCCAACATTGTTGAAAGATATGGAAAAGGCGGAATCTACAAGACCTTCATGTTTGGAAACCCCAGTATCTTAGTCACAAGCCCCGAAGGATGCAGGAAAGTCTTAACAGACGACGACAACTTCAAACCCGGCTGGCCTACATCCACTGAGGAGCTGATTGGGAAGAAGTCGTTCGTTAGCATTTCCTACGAAGAACACAAGCGTCTCAGGCGCTTAACATCAGCTCCTGTGAATGGTCATGAGGCATTGTCCTTGTATATCCCATACATAGAAAAGAACGTAATATCTGACTTGGAGAAATGGTCTAAAATGGGAAACATCGAGTTCTTGACCGGAGTCCGAAAGCTTACTTTTAAGATAATTATGTACATATTTCTTAGCGCCGAGAGTGGGGACGTAATGGAAGCTTTGGAGAAGGAATATACTATACTGAACTATGGAGTTAGAGCTTTGGCTATCAACATCCCCGGATTCGCTTTTCATAAAGCATTCAAGGCTCGGAAAAATCTGGTGGCTACTCTCCAAGCAACAGTGGATGAGAGAAGGCAAAGGGAGAGAGAAAATTCTTCAGCACGGGAGAAAGACATGTTGGATGCTCTGCTGCATGTTGAAGATGAGAACGGTAGAAAATTGACCGATGAGGAGATCATTGATCTTCTCATAATGTATTTGAACGCCGGCCATGAATCATCTGGTCATGTCACCATGTGGGCTACTCTTTTGCTACAAGGCCACCCCGAAATCTTCCAAAGAGCCAAGGCTGAGCAAGAGGAGATTGTTAAGAACAGGCCACCTACACAGAAGGGTTTGACCCTTAGGGAAGTTCGAAAAATGGAGTATCTCTCCCAGGTGATCGATGAAACGCTTCGTTGGCTAACGTTTTCACTGATGGTATTTCGAGAGGCGAAAGCAGATGTCAACATAGGAGGTTATCTTTTTCCCAAAGGATGGAAGGTTCTGGTTTGGTTCAGGGCCGTTCACTATGATCCCGAAATATATCCCAATCCAGAGGTGTTCAATCCTTCAAGATGGGATAATTTCACACCCAAGGCTGGAACTTTCCTCCCCTTCGGAGCAGGCAGCAGGCTCTGCCCCGGAAACGATCTTGCCAAGCTGGAAATTTCCATTTTCCTTCACTACTTTCTTCTCAACTATCGGCTTGAGAGGGTTAATCCAGGGTGCGAATTGATGTACCTACCGCATCCAAGGCCTGTGGACAATTGCCTGGCAAGAGTGAGGAAAGTAGCCTAG 1467 0.454 MGLASSWVLYTAIFAGALALRWVLLRVNKWVYEGRLKGKSYHLPPGDLGWPLIGNMWTFLRAFKTKNPDSFISNIVERYGKGGIYKTFMFGNPSILVTSPEGCRKVLTDDDNFKPGWPTSTEELIGKKSFVSISYEEHKRLRRLTSAPVNGHEALSLYIPYIEKNVISDLEKWSKMGNIEFLTGVRKLTFKIIMYIFLSAESGDVMEALEKEYTILNYGVRALAINIPGFAFHKAFKARKNLVATLQATVDERRQRERENSSAREKDMLDALLHVEDENGRKLTDEEIIDLLIMYLNAGHESSGHVTMWATLLLQGHPEIFQRAKAEQEEIVKNRPPTQKGLTLREVRKMEYLSQVIDETLRWLTFSLMVFREAKADVNIGGYLFPKGWKVLVWFRAVHYDPEIYPNPEVFNPSRWDNFTPKAGTFLPFGAGSRLCPGNDLAKLEISIFLHYFLLNYRLERVNPGCELMYLPHPRPVDNCLARVRKVA* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g0344 488 SUPERFAMILY Cytochrome P450 39 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 Pfam Cytochrome P450 44 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g0344 488 PANTHER CYTOCHROME P450 26 41 476 - -
Vvi15g0344 488 CDD CYP90-like 76 484 - -
Vvi15g0344 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vvi15g0344 488 FunFam Ent-kaurenoic acid oxidase 34 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi15g0344 Vvi-Chr15 9799164 9801559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi15g0344 1 484 Cytochrome P450 AT1G05160 67.762 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g0344 K04123 - vvi:100246155 998.808