LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi15g0328	ATGGAACAAAAACAGTCGGGTTGCACAGGAGGAGCAGAAGCAGTTTTAAATCTTCAGCCAAACTCTTCAATCTCTATCACGTATCATCCTCATTTTGGTCCTCATGATGATCTGATCCTCCTTGAAATTGATGACAAGCTTCTTCCAGATGTCCTCCACCAGAGGGTAACTTTAAGAGGACAACCCAATGAAGATGCTGTTCTTTGTACTCAATCAAAGACTTATTCTATCAAATTTGTTGGAAACTCCAATTCTGTGTTCCTTATACCCCCAGTAGATCAGTCAGCATTGCATGAACATCCACAATATTCTGATGAGAAAGATGATGACCAGCGGGTTGTTGCATCTGTCATTAAAGTGGCTCCTGGTAACATGGAGCTTGTTGAGGTTGCTCCCAGGCTGGACAAGCTTAAATTGCTTCTCTTGGAGAATCCTTTTACATCTGAGGAGGTCTCAGAGAAAGAGGAATTGGAAGGGATGGAGGAACAGAAAACAAATTTGTTTAAATGGAATGATCTTATAGATAGGGTTCAAGCCAGTGATGATGAATTGAGGTCTGGATTACGGGCTCTTTCAGCAGTAGAGATTGATGGGTATTGGAGAATTGTGGATGAGAAGTACATGGGTACTATTCTGAATATGCTTCTGCACAACTCAGTGTTGAATGATTGGTCATTAGATGCACTTGGTGAAGATGAAGTTGTGGGTGTTCTGGAATCAGATGGTTTTCCTCGCACACTAGGGTTACATTGTTTGCAAGTTTATGGTAGCAAGGTGGATGAGGGTGTTGGCAGTTGTGTATGGAAGTTGGATGAGAGGCGCTTATGCATTCATTTTGCTAGAGAAATCTTGAAGGATGGGAAGAGGAAGATGGAAAGTTTCATGGAGGAGTGGATTCAAAAGATTCCAGATGGGATGCAGGCAAGTTTTGACATGTTGGAAGGTGAAGTTTTGACAGAAAAGTTTGGGGTTGAGACATGGGTTCGTGCCTTTAGTGTTTCTTCCCTGCCCTCTAACCCAGCTGCACGTTTCTCCATGCTTTTTCAAGAGCGGCCAAAATGGGAGTGGAAGGATCTACAGCCCTATATAAGGGATTTGACTGTACCGGGTCTTTCTTCAGAAGGCTTGCTTCTGAAATACACACGAAAAACACAACCAAACTCAGATGCAGAGCCTGTATTTAGTGCCAGATAG	1194	0.4288	MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRGQPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKVAPGNMELVEVAPRLDKLKLLLLENPFTSEEVSEKEELEGMEEQKTNLFKWNDLIDRVQASDDELRSGLRALSAVEIDGYWRIVDEKYMGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLHCLQVYGSKVDEGVGSCVWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQASFDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRKTQPNSDAEPVFSAR*	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi15g0328	397	Pfam	Sister chromatid cohesion protein Dcc1	40	363	IPR019128	GO:0007064\|GO:0031390
	Vvi15g0328	397	PANTHER	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	9	397	IPR019128	GO:0007064\|GO:0031390

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi15g0328	10	397	C3H Transcription Factor Family	AT2G44580	61.069	1.21e-172	485

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi15g0328	K11271		-	vvi:100243575	769.615